Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01484 ATGGCTTGTAGGGGTTGTTGGGAATGCCTTTTGAAGCTTTTGAACTTCTTAATGACCCTTGTTGGTCTGGCCATGGTGGGATATGGGATTTATCTGCTGGTTGAATTCGGTAAAGCTCTAGATAACGCTCTGACTGTTTCTACTGGAAATGATAATCAAACTCTAGTTCAACTTGGTCGACCCATGCTTATGGCTGTGTCTCTCTCCAACAGTTTTCTTGATGATTTGCCCAAGGCTTGGTATGAATGCTGCTCTTTTCTCTTGCCAATTTTTGGGAAGAGTGTCCTTAGAGTGCAAGCTGAGAGTGAGGATTATGAATTGAAGCAAATGAGGGACATGGTTCCTGCCAGAAAGAGATGGGAAGCTCTGGAATCATACTACCAAGTTTTTCACAGATACAAAGGAGAGTTGTCGAAGCCCTTCAATGAAGCGAGTTTGTTTTTGGGTAATATGGAATCGCAACTCAGCAACCTTTGTAAGGGAACACTGACAAAGTCTTCGGATAACAACTACTCAGGTAGCTAG 525 0.4305 MACRGCWECLLKLLNFLMTLVGLAMVGYGIYLLVEFGKALDNALTVSTGNDNQTLVQLGRPMLMAVSLSNSFLDDLPKAWYECCSFLLPIFGKSVLRVQAESEDYELKQMRDMVPARKRWEALESYYQVFHRYKGELSKPFNEASLFLGNMESQLSNLCKGTLTKSSDNNYSGS. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01484 174 SMART KNOX2_2 97 160 IPR005541 GO:0003677|GO:0005634
Seca7g01484 174 Pfam KNOX2 domain 123 159 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01484 Seca-Chr7 27051103 27054145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01484 121 162 Homeobox Transcription Factor Family AT1G23380 45.238 5.54e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01484 - - lja:Lj4g3v1154460.2 146.747