Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01481 ATGAAGCTCTTGACATCATCTTTTTCATCATCTCCATCATCGTCATCCACCTTCAGTTTTGACCCAACTTTGTGCCACTCCAAAAGTGCTGCTGCTACTGCAGGGTGTCTCACAGCCATTCTGCGCAGGATTCTCTGTTCTGGTGGCCTTCCAACACACCCTTCAGACCAAACTAGAGAACTTGATTCAATGTCAATTGTGGGTGGCAAAGTTCAAAACTTTAAGAAGAGTGAATGTGGTAATAGTCCTAATTCTACAACAAATGCTCCTGGGGTAGTGGCAAGGTTAATGGGTTTGGATTCAATGGGAGAGAAAGTGATACCCTATGAAGCAACCTCAAATTCACTTTCACGTAGCCGATCCATGAACTCTGCGGATTACTTAGGGGAATGCAAGAGAATGGAGGGTCTACATAGGCGTGTTAAATCTTCTTCATTTCGTGAGGTGCCAACTTTTCACTTGGTTGAAAATGAGAACTTTTTGGTATTCAGCTTTGAAAGTGGAGGTGAGAGTAGAGAATTCAAGTCCAGAGGGAGAAGAAAAGAAACGGGTTGTGCAGAGTTGAAGCAGAAAAGAAGAGAGAGAGGTGAGTTGAAGAAGAACAAGAGAGAAAAAGTTGATGATAAGAAGGGGAAATTGAGCAAAAGGGTGTCTGATATGTCTGATGTTAATGTGGGAAATGATGGTGAAATTCAATTTGGTAACACTTTGTTTAGAAGCATTGATTTAGAAGCAGAGAGATTCTCACAGCCCATGAAGCGTAAGGAAGTTACCAATGGTGAGAAAGTGAAGAGGAGAAAGAAAGGAATGGCATGTTACACAGAAAAGAAGGTAGAAAGTGAATGCGGTTCAGAGGATTCAAGCCCAGTTTCTGTATTTGATTTTGAGCGCCAAGCTGCTGAAACAGAGGAAGACTTTTTTGGTGTTGATAAGAGTTGGAGAAGAAAATTGTCACCAGAGCTTGAAAATGACCAGCCCTTTATTCTAAATTCTGATAGTAATTTGATGATTGATGAGAGGAATGTTAAGGCAAATGAGAACAGCAAACATGAAGGATCCAACAAAAAAGAGAAGCAAAGCCAGGAATGTGGAGATATTTGGGGTGAAAGGGACCAAACACTTATCTATGCCATGCCTTAG 1140 0.4132 MKLLTSSFSSSPSSSSTFSFDPTLCHSKSAAATAGCLTAILRRILCSGGLPTHPSDQTRELDSMSIVGGKVQNFKKSECGNSPNSTTNAPGVVARLMGLDSMGEKVIPYEATSNSLSRSRSMNSADYLGECKRMEGLHRRVKSSSFREVPTFHLVENENFLVFSFESGGESREFKSRGRRKETGCAELKQKRRERGELKKNKREKVDDKKGKLSKRVSDMSDVNVGNDGEIQFGNTLFRSIDLEAERFSQPMKRKEVTNGEKVKRRKKGMACYTEKKVESECGSEDSSPVSVFDFERQAAETEEDFFGVDKSWRRKLSPELENDQPFILNSDSNLMIDERNVKANENSKHEGSNKKEKQSQECGDIWGERDQTLIYAMP. 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01481 379 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g01481 379 Pfam DUF761-associated sequence motif 87 102 IPR032795 -
Seca7g01481 379 Coils Coil 188 208 - -
Seca7g01481 379 MobiDBLite consensus disorder prediction 342 365 - -
Seca7g01481 379 MobiDBLite consensus disorder prediction 190 221 - -
Seca7g01481 379 MobiDBLite consensus disorder prediction 339 366 - -
Seca7g01481 379 PANTHER OS05G0128300 PROTEIN 16 369 - -
Seca7g01481 379 MobiDBLite consensus disorder prediction 190 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01481 Seca-Chr7 26997403 26999304 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01481 29 322 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.530 1.72e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01481 - - gmx:102660974 390.963