Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01478 ATGTCAATTGTGGGTGGCAAAGTTCAAAACTTTAAGAAGAGTGAATGTTCTAATAGTCCTAATTCTACAACAAATGCTCCTGGAGTAGTGGCAAGGTTAATGGGTTTAGATTCAATGCGAGAGAAAGAGATACCCAATGAAACAACCTCAAATTCACTTTCACGTAGCCGATCCATGAACTCTGTGGATTACTTAGGGGAATGCAAGAGAATGGAGGGTCTACATAGGCGTGTTAAATCTTCTTCTTCATTTCGTGAGGTGCCAACTTTTCATTTGGTTGAAAATGAGAACTTTTTGGTTTTCATCTTTGAAAGTGGAGGTGAGAGTAAAGAATTCAAGAGAGAAAAGAAACGGGTTGTGCAGAGTTGA 369 0.3902 MSIVGGKVQNFKKSECSNSPNSTTNAPGVVARLMGLDSMREKEIPNETTSNSLSRSRSMNSVDYLGECKRMEGLHRRVKSSSSFREVPTFHLVENENFLVFIFESGGESKEFKREKKRVVQS. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01478 122 MobiDBLite consensus disorder prediction 11 28 - -
Seca7g01478 122 Pfam DUF761-associated sequence motif 23 39 IPR032795 -
Seca7g01478 122 PANTHER OS05G0128300 PROTEIN 15 117 - -
Seca7g01478 122 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01478 Seca-Chr7 26916109 26916477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01478 25 112 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 37.500 6.05e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01478 - - lja:Lj2g3v2277510.1 154.451