Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01477 ATGAAGCTCTTGACATCATCTTTTTCATCATCCTCATCATCTTCATCCACCTTCAGTTTTGACCCAACTTTGTGCCACTCCAAAAGTGTTGCTGCTACTGCAGGGTGTCTCACAGCCATTCTGCGCAGGATTCTCTATTCTGGTGGCCTTCCAACACACCCTTCAGACCAAATTAGAGAACTTGATTCAATGTCAATTGTGGGTGGCAAAGTTCAAAACTTTAAGAAGAGTCAATGTGCTAATAGTCCTAATTCTACAACAAATGCTCCTGGGGTAGTGGCAAGGTTAATGGGTTTGGATTCAATGGGAGAGACAGAGATACCCTATGAAGCAACCTCAAATTCACTTTCACGTAGCCGATCCATGAACTCTGTGGATTACTTAGGGGAATGCAAGAGAGTGGAGGGTCTACATAGGCGTGTTAAATCTTCTTCATTTCGTGAGGTGCCAACTTTTCACTTGGTTGAAAATGAGAACTTTTTGGTTTTCAGCTTTGAAAGTGGAGGTGAGAGTAGAGAATTCAAGTCCAGAGGGAGAAGAAAAGAAACGGGTTGTGCAAAGTTGAAGCAGAAACGAAGAGAGAGAGGTGAGTTGAAGAAGAACAAGAGAGAAAAGGTTGATGATGAGAAGGGGAACTTGAGCAAAAGGGTGTCTGATATGTCTGATGTTAATGTGGTAAATGATGGTGAACTTCAATATGGTAACACTTTGTTCAGAAGCATTGATTTAGAAGCAGAGAGATTCTCACAAACCATGAAGCGTAAGGAAGTTACCAGTGCTGAAAAAGTGAAATGGAGAAAGAAAGGAATGCCATGTTACACAGAAAAGAAGGTAGAAAAAGTGAATGCGGTTCAGAGGATTCAAGCCCAGTTTCTGTATTTGATTTTGAGCGCCAAGCTGCTGAAACAAGTTTGTTTCTTCAATATGGCCACAATGCTTGTTTAA 945 0.4138 MKLLTSSFSSSSSSSSTFSFDPTLCHSKSVAATAGCLTAILRRILYSGGLPTHPSDQIRELDSMSIVGGKVQNFKKSQCANSPNSTTNAPGVVARLMGLDSMGETEIPYEATSNSLSRSRSMNSVDYLGECKRVEGLHRRVKSSSFREVPTFHLVENENFLVFSFESGGESREFKSRGRRKETGCAKLKQKRRERGELKKNKREKVDDEKGNLSKRVSDMSDVNVVNDGELQYGNTLFRSIDLEAERFSQTMKRKEVTSAEKVKWRKKGMPCYTEKKVEKVNAVQRIQAQFLYLILSAKLLKQVCFFNMATMLV. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01477 314 MobiDBLite consensus disorder prediction 1 21 - -
Seca7g01477 314 PANTHER OS05G0128300 PROTEIN 17 280 - -
Seca7g01477 314 Pfam DUF761-associated sequence motif 86 102 IPR032795 -
Seca7g01477 314 Coils Coil 188 208 - -
Seca7g01477 314 MobiDBLite consensus disorder prediction 173 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01477 Seca-Chr7 26891457 26892401 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01477 35 181 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 34.459 1.12e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01477 - - gmx:102660974 273.092