Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca7g01457 | ATGGCGGTTGGTGGTGAGAGGAGTTATGGGGACAGGAAGCGTAAAAGAGGGTCGACGAAGAGAAAGCTTCTTGTCAATGAAAGAGTTGAGGTGAAGAGTTTTGAAGAAGGTTTTATGGGGTCATGGCACCCAGGGGAAGTCGTTCGCTGTGGAAGAGAAAAACGACATATAAGATATGATAGTGTTCTTGATGTTGATGGAGTAAACTATGTCGTGGAAGCGGTGAGGGTTCCCAATGTTTTGGATGGTGTTAATTCTCCTTCAGTTTCTTGGAGTGAACGTGGGCGCATTAGACCCAAACCTCCCGTGATTGAGTTTGGAGAAAGGGACCTTTCATTTGGTCTCTGTGTTGATGTGAATTATCAGGATGCTTGGTGGGAAGGTGTTATATTTGATCACTGTGATCAAATGAATGAGAGGAGTGTGTTCTTCCCTGATTTGGGGGATGAAATGAAGGTTGGAATTCAACAACTGAGGATCACTCAGGACTGGGATGAAGTTACTGAGTATTGGAAGACAAGAGGGAAGTGGGTGTTTCTTGAATTATTTGAGGAGTGTGAGCAGGTATCTTTTATTGGAGCTTCAGCAAAGCAGATTTGGTATGATGTGAGAGTAAGAGAAGATTTTGAATCCATAAAAGACTGGTATTGCAATGTGAAAGACTTGTGGAGGAAACCTGTAGTGGAGGTAGTTGGTGACTATTATACCCTCACACTACAAGAAATCTTCCCATCCATAAACCTTTATGAGGATTTGTTGACAGGAATACCAGAACTGGAGTTATCTCAACCCATTGATAATAATCACAATGATTCTAGTCATAGTGATGTATCTGGCTCTGATTGTGATATGGATAAGAACTGTGATACCATAATTCTCATTCCAGAGGAACATGGTACTGATCATTCATTTGACTCTGATTCTGGATCTGAAAAGCCTAAAGAAAATTGTGATAGTATCATTCCAATCCAAGAGGAATATGATACTGACAACGCCCTTTGTGATACTAATCACAATAATGTATTGGGTTCTGACATTGCAATAAGCGAGAGCCTTGAGGAAAAAGATGATACTGATCTAAACTGTGGGAACATCATTCCCAATGAAGAGCAATATGGTACAAATCCTATGGTTGAAGGGGAACTTGAGAAGGATATTCCTTTATCTCCACTTCAAGAGGACTTTCCTGAGTCTGAAACAGAAACTACAAGCGATGATGATGATGTTGAAGAAAATTCAGGTTCTAGCAGTTTTGTAAAAAGAAATAAACGTAGGTGCTCAGCGTCCATAACTTGGAATATTCTGACGCTGGATGATGTTGAACCCTTCCCTGATGTTATTGATGAATATATAGCTGGATGTAGGAGCAAGACGATTAGGGAACAATTGAAGACAAAAGTAAAACAACATCTTACATATCTTGGATGGACAATTGAATGGACTTTGAATAAACATGATCCTCAAGTAAAAAGATACAGGTACAAGTCACCTGATGCAAATGACCAGAAGCTTTACAACTCAATTTTGAAAGTACTTAAATCTATAAAAAGGCAAGAGAAGTCAAACATGAACTCTGTGCAGCCCCAAATTGACAATAGTATGCATTCTCCAATTGATGACAACCTTTCACATTTGCTTTCTGATCAACCCCAAATGAACCAGGATTTAGGTGTTAATCCTACAACGGGGGAAGCTTCTCCTGTCAAAGCTGATATTGAACCTGAATTGTGTCCTCAAGCTGTTGTCAAATATTACTTGCATGCATTAGAGAACCAACAAGCTGATAAAAGAAAATGGAAATTGAAAGCAAAGAAGCATCTGTTAGCAGAAGGATGGATGTTTAGTTACCCAACTGATAATAGGAAGACAACTTTGTATACGTCTCCGCAAAATCAGTTGCTAGGCACACTTCGCGGTGCTTGCAGACTATACATTAAGGAAAAGATTCCTGAATGGACTGCTTCTAGCAGACCTTTGAATGTATTAGACACTGATAAGGCAAGTGTTGATCATGTTAATGATGGTGATGATCTATTGCAGTGTGTGTACCAATTGCTTCAGAAAGAGCCTGAATTACATGACATAGATGGTTTACCAGCAATCAGACCAACTGGGAATAGAAACAACAAACACACCAAGAAGTCAAAGGCAAAGTTCCGGAGGGTATTATTACCTATGCAGGTGCTAAGAACATGCAAAAAGGTGCAACAGTTGTCTGCCCCTAGTATGGAACCAAAAAATCCTCAAAATGTTCTGTCTTGGTTAATAGATAATGAAATGGTGTTGCCAAGAAATAAGGTCTTTTGTTGGGAAAATGGAGATAGGAACACTCCTGAGTTCGTGGGGAGGATTACTCGGAATGGGATAAAGTGTAGGTGTTGTCATAAGCTATATGGTCCTGCTGGTTTTGTGAATCATGCAGGAGGAGGTGACAACCGCATGCCTTCAGCGAGTATATTTTTGAAAGATGGAAGGTCATTGTTTGATTGCATGGTACAAGTAATGCATGATCATAGGACAAGGGAAATCATTGAGACACCAGGTAGTAATCTATTGGAAGGTGAAAATGACATTGTTTGTACTGTCTGTAACGATGGTGGTGAAGTCCTTTTATGTGACAAATGCCCCTCAGTATTTCATAAGAAGTGTCTTAACATGGAGGACATCCCTGATGGTGACTGGTTTTGCCCATTATGTCGTTGCGGGATCTGTTGCCAAATCAAATTTGAAGGGACTAAGCATGCAGATCTGATTACTTGTGTTCAGTGTGAGCATAAATATCACATTGGATGCTTGAAAAGTAGACCTAATGATCAATCAACAAAATACCTGAAACATTGGTTCTGCGGTAAAGAGTGTGAACAGGTATATGTTGGCCTGCATGATATTTTGGGAAAGCCATTTACAGTGAGCGAGAAAAACCTAACCTGGACACTGATTAAGTGGGAAGACCCAGAGAATGGTGAAGTTGGAAGTGCTGAAAATGACTTGCTGGCAGAGACTTACAGCAAACTTAATGTTGCTTTGTCAGTAATGCATGAGTGTTTTGAGCCCCTCAAGAACCCTTTCTCTAATAGGGATCTTGTTGATGATGTTCTATTCAACAGAAGGTCGAAGCTCAATCGACTGAATTTTCAAGGTTTCTATACTATACTTCTGGAGAGAGATGAAGAAATGATTAGTGTGGCAACTCTTAGGGTGTTTGGAGAGAAGGTAGCAGAATTACCTCTTGTTGGTACTAGAGATCGGTTTCGCCGAAAAGGAATGTGTGGAATCTTAATGGCTGAGCTTGAAAAGAAGCTGGCCGAACTAGGAGTGGAGAGGCTAGTGTTGCCAGCTATTCCTAGTGTTCTGAATTCGTGGAAAAATACTTTTGGCTTCTTAGAAATGACGGATTTTGAGAGAGCACAATTTTTGGACTGTGCTTTCTTAGATTTCCAGGGAACTATAATGTGTCAGAAGCTATTAAAGAGGGTTCCTTCTCCAAATTCATCTTTAATAGGAGAAACAGATCCAAAAGAGCAATAA | 3528 | 0.4011 | MAVGGERSYGDRKRKRGSTKRKLLVNERVEVKSFEEGFMGSWHPGEVVRCGREKRHIRYDSVLDVDGVNYVVEAVRVPNVLDGVNSPSVSWSERGRIRPKPPVIEFGERDLSFGLCVDVNYQDAWWEGVIFDHCDQMNERSVFFPDLGDEMKVGIQQLRITQDWDEVTEYWKTRGKWVFLELFEECEQVSFIGASAKQIWYDVRVREDFESIKDWYCNVKDLWRKPVVEVVGDYYTLTLQEIFPSINLYEDLLTGIPELELSQPIDNNHNDSSHSDVSGSDCDMDKNCDTIILIPEEHGTDHSFDSDSGSEKPKENCDSIIPIQEEYDTDNALCDTNHNNVLGSDIAISESLEEKDDTDLNCGNIIPNEEQYGTNPMVEGELEKDIPLSPLQEDFPESETETTSDDDDVEENSGSSSFVKRNKRRCSASITWNILTLDDVEPFPDVIDEYIAGCRSKTIREQLKTKVKQHLTYLGWTIEWTLNKHDPQVKRYRYKSPDANDQKLYNSILKVLKSIKRQEKSNMNSVQPQIDNSMHSPIDDNLSHLLSDQPQMNQDLGVNPTTGEASPVKADIEPELCPQAVVKYYLHALENQQADKRKWKLKAKKHLLAEGWMFSYPTDNRKTTLYTSPQNQLLGTLRGACRLYIKEKIPEWTASSRPLNVLDTDKASVDHVNDGDDLLQCVYQLLQKEPELHDIDGLPAIRPTGNRNNKHTKKSKAKFRRVLLPMQVLRTCKKVQQLSAPSMEPKNPQNVLSWLIDNEMVLPRNKVFCWENGDRNTPEFVGRITRNGIKCRCCHKLYGPAGFVNHAGGGDNRMPSASIFLKDGRSLFDCMVQVMHDHRTREIIETPGSNLLEGENDIVCTVCNDGGEVLLCDKCPSVFHKKCLNMEDIPDGDWFCPLCRCGICCQIKFEGTKHADLITCVQCEHKYHIGCLKSRPNDQSTKYLKHWFCGKECEQVYVGLHDILGKPFTVSEKNLTWTLIKWEDPENGEVGSAENDLLAETYSKLNVALSVMHECFEPLKNPFSNRDLVDDVLFNRRSKLNRLNFQGFYTILLERDEEMISVATLRVFGEKVAELPLVGTRDRFRRKGMCGILMAELEKKLAELGVERLVLPAIPSVLNSWKNTFGFLEMTDFERAQFLDCAFLDFQGTIMCQKLLKRVPSPNSSLIGETDPKEQ. | 1176 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca7g01457 | 1175 | ProSiteProfiles | Zinc finger PHD-type profile. | 857 | 902 | IPR019787 | - | |
| Seca7g01457 | 1175 | SMART | PHD_3 | 859 | 900 | IPR001965 | - | |
| Seca7g01457 | 1175 | SMART | PHD_3 | 901 | 953 | IPR001965 | - | |
| Seca7g01457 | 1175 | Pfam | Agenet domain | 27 | 102 | IPR008395 | - | |
| Seca7g01457 | 1175 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 995 | 1156 | IPR000182 | GO:0016747 | |
| Seca7g01457 | 1175 | ProSiteProfiles | Zinc finger RING-type profile. | 860 | 900 | IPR001841 | - | |
| Seca7g01457 | 1175 | SMART | agenet_At_2 | 109 | 166 | IPR014002 | - | |
| Seca7g01457 | 1175 | SMART | agenet_At_2 | 21 | 83 | IPR014002 | - | |
| Seca7g01457 | 1175 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 851 | 901 | IPR013083 | - | |
| Seca7g01457 | 1175 | Gene3D | - | 998 | 1116 | - | - |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca7g01457 | - | - | adu:107471457 | 1135.94 |
Showing 1 to 1 of 1 entries