Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g01457 | ATGGCGGTTGGTGGTGAGAGGAGTTATGGGGACAGGAAGCGTAAAAGAGGGTCGACGAAGAGAAAGCTTCTTGTCAATGAAAGAGTTGAGGTGAAGAGTTTTGAAGAAGGTTTTATGGGGTCATGGCACCCAGGGGAAGTCGTTCGCTGTGGAAGAGAAAAACGACATATAAGATATGATAGTGTTCTTGATGTTGATGGAGTAAACTATGTCGTGGAAGCGGTGAGGGTTCCCAATGTTTTGGATGGTGTTAATTCTCCTTCAGTTTCTTGGAGTGAACGTGGGCGCATTAGACCCAAACCTCCCGTGATTGAGTTTGGAGAAAGGGACCTTTCATTTGGTCTCTGTGTTGATGTGAATTATCAGGATGCTTGGTGGGAAGGTGTTATATTTGATCACTGTGATCAAATGAATGAGAGGAGTGTGTTCTTCCCTGATTTGGGGGATGAAATGAAGGTTGGAATTCAACAACTGAGGATCACTCAGGACTGGGATGAAGTTACTGAGTATTGGAAGACAAGAGGGAAGTGGGTGTTTCTTGAATTATTTGAGGAGTGTGAGCAGGTATCTTTTATTGGAGCTTCAGCAAAGCAGATTTGGTATGATGTGAGAGTAAGAGAAGATTTTGAATCCATAAAAGACTGGTATTGCAATGTGAAAGACTTGTGGAGGAAACCTGTAGTGGAGGTAGTTGGTGACTATTATACCCTCACACTACAAGAAATCTTCCCATCCATAAACCTTTATGAGGATTTGTTGACAGGAATACCAGAACTGGAGTTATCTCAACCCATTGATAATAATCACAATGATTCTAGTCATAGTGATGTATCTGGCTCTGATTGTGATATGGATAAGAACTGTGATACCATAATTCTCATTCCAGAGGAACATGGTACTGATCATTCATTTGACTCTGATTCTGGATCTGAAAAGCCTAAAGAAAATTGTGATAGTATCATTCCAATCCAAGAGGAATATGATACTGACAACGCCCTTTGTGATACTAATCACAATAATGTATTGGGTTCTGACATTGCAATAAGCGAGAGCCTTGAGGAAAAAGATGATACTGATCTAAACTGTGGGAACATCATTCCCAATGAAGAGCAATATGGTACAAATCCTATGGTTGAAGGGGAACTTGAGAAGGATATTCCTTTATCTCCACTTCAAGAGGACTTTCCTGAGTCTGAAACAGAAACTACAAGCGATGATGATGATGTTGAAGAAAATTCAGGTTCTAGCAGTTTTGTAAAAAGAAATAAACGTAGGTGCTCAGCGTCCATAACTTGGAATATTCTGACGCTGGATGATGTTGAACCCTTCCCTGATGTTATTGATGAATATATAGCTGGATGTAGGAGCAAGACGATTAGGGAACAATTGAAGACAAAAGTAAAACAACATCTTACATATCTTGGATGGACAATTGAATGGACTTTGAATAAACATGATCCTCAAGTAAAAAGATACAGGTACAAGTCACCTGATGCAAATGACCAGAAGCTTTACAACTCAATTTTGAAAGTACTTAAATCTATAAAAAGGCAAGAGAAGTCAAACATGAACTCTGTGCAGCCCCAAATTGACAATAGTATGCATTCTCCAATTGATGACAACCTTTCACATTTGCTTTCTGATCAACCCCAAATGAACCAGGATTTAGGTGTTAATCCTACAACGGGGGAAGCTTCTCCTGTCAAAGCTGATATTGAACCTGAATTGTGTCCTCAAGCTGTTGTCAAATATTACTTGCATGCATTAGAGAACCAACAAGCTGATAAAAGAAAATGGAAATTGAAAGCAAAGAAGCATCTGTTAGCAGAAGGATGGATGTTTAGTTACCCAACTGATAATAGGAAGACAACTTTGTATACGTCTCCGCAAAATCAGTTGCTAGGCACACTTCGCGGTGCTTGCAGACTATACATTAAGGAAAAGATTCCTGAATGGACTGCTTCTAGCAGACCTTTGAATGTATTAGACACTGATAAGGCAAGTGTTGATCATGTTAATGATGGTGATGATCTATTGCAGTGTGTGTACCAATTGCTTCAGAAAGAGCCTGAATTACATGACATAGATGGTTTACCAGCAATCAGACCAACTGGGAATAGAAACAACAAACACACCAAGAAGTCAAAGGCAAAGTTCCGGAGGGTATTATTACCTATGCAGGTGCTAAGAACATGCAAAAAGGTGCAACAGTTGTCTGCCCCTAGTATGGAACCAAAAAATCCTCAAAATGTTCTGTCTTGGTTAATAGATAATGAAATGGTGTTGCCAAGAAATAAGGTCTTTTGTTGGGAAAATGGAGATAGGAACACTCCTGAGTTCGTGGGGAGGATTACTCGGAATGGGATAAAGTGTAGGTGTTGTCATAAGCTATATGGTCCTGCTGGTTTTGTGAATCATGCAGGAGGAGGTGACAACCGCATGCCTTCAGCGAGTATATTTTTGAAAGATGGAAGGTCATTGTTTGATTGCATGGTACAAGTAATGCATGATCATAGGACAAGGGAAATCATTGAGACACCAGGTAGTAATCTATTGGAAGGTGAAAATGACATTGTTTGTACTGTCTGTAACGATGGTGGTGAAGTCCTTTTATGTGACAAATGCCCCTCAGTATTTCATAAGAAGTGTCTTAACATGGAGGACATCCCTGATGGTGACTGGTTTTGCCCATTATGTCGTTGCGGGATCTGTTGCCAAATCAAATTTGAAGGGACTAAGCATGCAGATCTGATTACTTGTGTTCAGTGTGAGCATAAATATCACATTGGATGCTTGAAAAGTAGACCTAATGATCAATCAACAAAATACCTGAAACATTGGTTCTGCGGTAAAGAGTGTGAACAGGTATATGTTGGCCTGCATGATATTTTGGGAAAGCCATTTACAGTGAGCGAGAAAAACCTAACCTGGACACTGATTAAGTGGGAAGACCCAGAGAATGGTGAAGTTGGAAGTGCTGAAAATGACTTGCTGGCAGAGACTTACAGCAAACTTAATGTTGCTTTGTCAGTAATGCATGAGTGTTTTGAGCCCCTCAAGAACCCTTTCTCTAATAGGGATCTTGTTGATGATGTTCTATTCAACAGAAGGTCGAAGCTCAATCGACTGAATTTTCAAGGTTTCTATACTATACTTCTGGAGAGAGATGAAGAAATGATTAGTGTGGCAACTCTTAGGGTGTTTGGAGAGAAGGTAGCAGAATTACCTCTTGTTGGTACTAGAGATCGGTTTCGCCGAAAAGGAATGTGTGGAATCTTAATGGCTGAGCTTGAAAAGAAGCTGGCCGAACTAGGAGTGGAGAGGCTAGTGTTGCCAGCTATTCCTAGTGTTCTGAATTCGTGGAAAAATACTTTTGGCTTCTTAGAAATGACGGATTTTGAGAGAGCACAATTTTTGGACTGTGCTTTCTTAGATTTCCAGGGAACTATAATGTGTCAGAAGCTATTAAAGAGGGTTCCTTCTCCAAATTCATCTTTAATAGGAGAAACAGATCCAAAAGAGCAATAA | 3528 | 0.4011 | MAVGGERSYGDRKRKRGSTKRKLLVNERVEVKSFEEGFMGSWHPGEVVRCGREKRHIRYDSVLDVDGVNYVVEAVRVPNVLDGVNSPSVSWSERGRIRPKPPVIEFGERDLSFGLCVDVNYQDAWWEGVIFDHCDQMNERSVFFPDLGDEMKVGIQQLRITQDWDEVTEYWKTRGKWVFLELFEECEQVSFIGASAKQIWYDVRVREDFESIKDWYCNVKDLWRKPVVEVVGDYYTLTLQEIFPSINLYEDLLTGIPELELSQPIDNNHNDSSHSDVSGSDCDMDKNCDTIILIPEEHGTDHSFDSDSGSEKPKENCDSIIPIQEEYDTDNALCDTNHNNVLGSDIAISESLEEKDDTDLNCGNIIPNEEQYGTNPMVEGELEKDIPLSPLQEDFPESETETTSDDDDVEENSGSSSFVKRNKRRCSASITWNILTLDDVEPFPDVIDEYIAGCRSKTIREQLKTKVKQHLTYLGWTIEWTLNKHDPQVKRYRYKSPDANDQKLYNSILKVLKSIKRQEKSNMNSVQPQIDNSMHSPIDDNLSHLLSDQPQMNQDLGVNPTTGEASPVKADIEPELCPQAVVKYYLHALENQQADKRKWKLKAKKHLLAEGWMFSYPTDNRKTTLYTSPQNQLLGTLRGACRLYIKEKIPEWTASSRPLNVLDTDKASVDHVNDGDDLLQCVYQLLQKEPELHDIDGLPAIRPTGNRNNKHTKKSKAKFRRVLLPMQVLRTCKKVQQLSAPSMEPKNPQNVLSWLIDNEMVLPRNKVFCWENGDRNTPEFVGRITRNGIKCRCCHKLYGPAGFVNHAGGGDNRMPSASIFLKDGRSLFDCMVQVMHDHRTREIIETPGSNLLEGENDIVCTVCNDGGEVLLCDKCPSVFHKKCLNMEDIPDGDWFCPLCRCGICCQIKFEGTKHADLITCVQCEHKYHIGCLKSRPNDQSTKYLKHWFCGKECEQVYVGLHDILGKPFTVSEKNLTWTLIKWEDPENGEVGSAENDLLAETYSKLNVALSVMHECFEPLKNPFSNRDLVDDVLFNRRSKLNRLNFQGFYTILLERDEEMISVATLRVFGEKVAELPLVGTRDRFRRKGMCGILMAELEKKLAELGVERLVLPAIPSVLNSWKNTFGFLEMTDFERAQFLDCAFLDFQGTIMCQKLLKRVPSPNSSLIGETDPKEQ. | 1176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g01457 | 1175 | ProSiteProfiles | Zinc finger PHD-type profile. | 857 | 902 | IPR019787 | - | |
Seca7g01457 | 1175 | SMART | PHD_3 | 859 | 900 | IPR001965 | - | |
Seca7g01457 | 1175 | SMART | PHD_3 | 901 | 953 | IPR001965 | - | |
Seca7g01457 | 1175 | Pfam | Agenet domain | 27 | 102 | IPR008395 | - | |
Seca7g01457 | 1175 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 995 | 1156 | IPR000182 | GO:0016747 | |
Seca7g01457 | 1175 | ProSiteProfiles | Zinc finger RING-type profile. | 860 | 900 | IPR001841 | - | |
Seca7g01457 | 1175 | SMART | agenet_At_2 | 109 | 166 | IPR014002 | - | |
Seca7g01457 | 1175 | SMART | agenet_At_2 | 21 | 83 | IPR014002 | - | |
Seca7g01457 | 1175 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 851 | 901 | IPR013083 | - | |
Seca7g01457 | 1175 | Gene3D | - | 998 | 1116 | - | - | |
Seca7g01457 | 1175 | MobiDBLite | consensus disorder prediction | 696 | 716 | - | - | |
Seca7g01457 | 1175 | Pfam | Tify domain binding domain | 782 | 833 | IPR032308 | - | |
Seca7g01457 | 1175 | SUPERFAMILY | FYVE/PHD zinc finger | 841 | 900 | IPR011011 | - | |
Seca7g01457 | 1175 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 902 | 956 | IPR013083 | - | |
Seca7g01457 | 1175 | CDD | PHD2_CHD_II | 859 | 899 | - | - | |
Seca7g01457 | 1175 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 1036 | 1138 | IPR016181 | - | |
Seca7g01457 | 1175 | PANTHER | PHD FINGER PROTEIN 12 | 574 | 1160 | IPR042163 | GO:0003714|GO:0045892 | |
Seca7g01457 | 1175 | Pfam | PHD-finger | 859 | 901 | IPR019787 | - | |
Seca7g01457 | 1175 | CDD | NAT_SF | 1051 | 1111 | - | - | |
Seca7g01457 | 1175 | SMART | ring_2 | 860 | 899 | IPR001841 | - | |
Seca7g01457 | 1175 | SMART | ring_2 | 901 | 956 | IPR001841 | - | |
Seca7g01457 | 1175 | MobiDBLite | consensus disorder prediction | 391 | 418 | - | - | |
Seca7g01457 | 1175 | MobiDBLite | consensus disorder prediction | 398 | 412 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g01457 | Seca-Chr7 | 26063762 | 26070120 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g01457 | 23 | 243 | PHD Transcription Factor Family | AT5G58610 | 44.395 | 1.22e-55 | 208 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Seca7g01457 | Agenet | 2.6e-13 | CL0049 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g01457 | - | - | adu:107471457 | 1135.94 |