Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01453 ATGGCGGTTGATGGTGAGAGGAGTTATGGGGACAAGAAGCGTAAAAGAGGGTCGACAAAGAGAAAGATTCTTGTCAATGAAAGAGTTGAGGTGAAGAGTTTTGAAGAAGGTCTTCTGGGGTCATGGCACCCAGGGAAAGTCATTCGTTGTGGGAGACAGAAGCGACATATAAGATATGACAATGTTCTTGATGATGATGGAGTAAACTATGTTGTGGAAGCGGTGAAGGTTCCCAATGTTTTGGATGGTGTTAGTTCTCCTTCAATTTCTTGGAGAGAACGTGGGCTCATTAGACCAAAACCTCCTGTGATTGGGTTTGGAGAAAAGAACCTTTCATTTGGTCTCTGTGTTGATGTGAATTATCAGGATGCTTGGTGGGAAGGTGTTATATTTGATCACTGTGATAAAATGAACGAGAGGAGTGTATTCTTCCCTGATTTGGGGGATGAAATGAAGGTTGGAATTCAACAACTGAGGATCACTCAGGACTGGGATGAAGTTACTGAGGATTGGAAGACAAGAGGGAAGTGGGTGTTTCTTGAATTGTTTGAGGAGTGTGAGCAAATATCCTATGTTGGAGCTTCAACAAAGCAGATTTGGTATGATGTGAGAGAAAGAGAAGATTTTGAATCCATAAGAGACTGGAGTTGCAATGTGAAAGACTTGTGGAGGGACCTTGTAATGGAGGTAGTTGGTGACTATTATACCCTCACACTACAAGAAATCTTCCCATCCATAAACCTTCATGAGGATTTCTTGATAGGAACACTAGAACTGGAGTTATCTCAACCCATTGATAATAATCGCAGTGATGCTAGTAACAGTGTTGTGTCTGGCTCTGACCGTGGAATCTCAAGGCCTAATGAAAATAAGGAGTCCTCAAGGTTGTTAGATATAGATCAGAACTATGATACCATAATTCTCATTCCAGAGGAACATGGTACTGATCATGCATTTGACTCTGATTCCGGATCTGAAAAGCCTAATGAAAACTGGGATAGTATCATTCCAATCCAAGAGGAATATGATACTGATAACGCCCTTTGTGATGCTAATCACAATACTGTATTGGGTTCTGACATTGCAATAAGTGAGAGCCCTGAGGAAAAATATGATACTGATAAAAAATGTGGGAACATCATTCCCAGTGTAGAGCAATATGGTACAAGTCCTATGGTAGAAGAGGAACCTGAGAAGGATATTCCTTTATCTCCACTTCAAGAGGACTTACCCGAGTATGAAACAGAAACTACAAGCGATGATGATAATGTTGAAGACAATTCAGGTTCTAGCAGTTCTGTAAAAAGCAATAAACGTAGACGCTCAGCGTCCATAACTTGGAATATTCTGACACTAAATGATGTTGAACCCTTCCCTGAAGTTATTGATGAATATATAGCTGGATGTAAGAGCAAAACGATTAGGGAACTATTGAAGACAAAAATAAAACAACATCTTACATATCTTGGATGGACAATTGAATGGACTTCAATTAAACATGATCCTCGAGTAAAAAGATACAGGTACAAGTCACCTGATGCAAATGACAAGATGCTTTACAACTCAATTCTAAAAGTACTTAAATCTATAAAAAGGCAAGAGAAGTACAACATGAACTCTGTGCAGCCCCAAATTGACAATAGTATGCATTCTCCAATTGATGACAACCTTTCACATTTGCTTTCTGATCAACCCCAAATGAACCAGGATTTAGATGTTAATCCTCCAACTGGGGAAGCTTCTCCTGTCAAAGCTGATATTGAACCTGAATTGTGTCCTCAAGCTGTTGTGAAATATTACTTGCATGCTTTAGAGAATCAACGGGCTGATCAAAGAAAATGGAAATTGAAAGCAAAGAAGCACCTGTTAGCAGAAGGGTGGATGTTTAACTACCCAACTGATAATAGGAAGACAACTTTGTATACGTCTCCACAAAATCAGTGGCTAGGAACACTTCGCGGTGCTTGCAGACTATACATTAAAGAAAAGATTCCTGAATGGACTGCTTCTGGCATACCTTTGAATGTCTCAGACATTGATGAGGCAAGTGCTGATCATGTTGATGATAGTGATGATCTATTGCACTGTGTGTACCAATTGCTTCAAAAAGAGCCTGAATTACATGACATAGATGGTTTACCAACAATCAGACCAACTGGGAATAGAAACAACAAACACACCAGGAAGTCAAAGGCAAAGTTCCAGAGGGTATTATTACCTATGCGAGTGCTAAGAACAAGAAAAAAGGTGCAACAGTTGTCTGCCTCTAGTATGGAACCAAAAAATCCTCAAAATGTTCTCTCTTGGTTAATAGATAATGACATGGTGTTGCCAAGAAATAAGGTCTTTTACAGGGCAAATGGAGACAAGAACACTCCAGAGTTCGAGGGGAGGATTACCCATGATGGGATAAAATGTATGTGTTGTCATAAGCTATATGGTCCTGCTGGTTTTGTGAATCATGCAGGAGGAGGTGACAACCGCATGCCTTCAACAAGTATATTTTTGAAAGATGGAAGGTCATTGTTTGACTGCATGGTACAAGTAATGTGTGATCATAGGACAAGGGAAATCATTGAGACACCAGGAAATAATCTGTTGGAAGGTGAAAATGACAACGTTTGTACTGTCTGTAACTATGGTGGTGAACTCATTTTATGTGACAAATGCCCCTCAGTATTTCATAAGAAGTGTCTTAACATGGAGGACATCCCTGATGGTGATTGGTTTTGTCCATCATGTCGTTGCGGGATCTGTGGCCAAATCAAATTTGAAGGAACTAAGTATGGAGATCTGATCACTTGTGTTCAGTGTGAGCATAAATATCACGTTGGATGCCTGAAAAGTAGACCTGATGATCAATCAACAAAATACCTGGAACATTGGTTCTGCGGTAAAGAGTGTGAACATGTATATGCAAGCTTGCATGATATTTTGGGGAAGCCAGTTACAGTGGGCGAGAAAAACCTAACCTGGACACTGATTAAGTGGGAAGACCCAAAGAATGGTAAAGTTGGAAGTGCTAAAAATGACTTGCTAGCAGAGACTTACAGCAAACTTAGTGTTGCTTTGTCAGTAATGCATGAGTGTTTTGAGCCCCTCAAGAACCCTTTCTCTAATAGGGATCTTGTGGATGATGTTCTGTTCAACAGATGGTCGGAGCTCAATCGACTGAATTTTCAGGGTTTCTATACTATACTTCTGGAGAGAAATGAAGAAATGATTAGTGTGGCAACTCTTAGGGTGTTTGGAGAGAAGGTAGCAGAATTACCTCTTGTTGGTACTAGAGGTCGGTATCGCCGAAATGGAATGTGTGGAATCTTAATGAAGGAGCTTGAAAAGAAGCTGGCCGAACTAGGAGTGGAAAGGCTAGTGTTGCCAGCTGTTCCTAGTGTACTGGATTCATGGAAAAATACTTTTGGCTTCTCAGAAATGACAGATTTTGAGAGAGCAAAGTTTTTGGATTGTGCTTTCTTAGATTTTCAGGGGACTATAATGTGTCAGAAGCTGTTAAAGAGGGTTCCTTCTCCAAATTCAGCTTTAATAGGAGAAACATATCCAAAAGAGCAACAAGATGGTTTCTCTGTTAAATGTAGAGTTAAATTTGACAAGTCTAGCTCAACATCAGAAGTAAACGAAACATAG 3645 0.4003 MAVDGERSYGDKKRKRGSTKRKILVNERVEVKSFEEGLLGSWHPGKVIRCGRQKRHIRYDNVLDDDGVNYVVEAVKVPNVLDGVSSPSISWRERGLIRPKPPVIGFGEKNLSFGLCVDVNYQDAWWEGVIFDHCDKMNERSVFFPDLGDEMKVGIQQLRITQDWDEVTEDWKTRGKWVFLELFEECEQISYVGASTKQIWYDVREREDFESIRDWSCNVKDLWRDLVMEVVGDYYTLTLQEIFPSINLHEDFLIGTLELELSQPIDNNRSDASNSVVSGSDRGISRPNENKESSRLLDIDQNYDTIILIPEEHGTDHAFDSDSGSEKPNENWDSIIPIQEEYDTDNALCDANHNTVLGSDIAISESPEEKYDTDKKCGNIIPSVEQYGTSPMVEEEPEKDIPLSPLQEDLPEYETETTSDDDNVEDNSGSSSSVKSNKRRRSASITWNILTLNDVEPFPEVIDEYIAGCKSKTIRELLKTKIKQHLTYLGWTIEWTSIKHDPRVKRYRYKSPDANDKMLYNSILKVLKSIKRQEKYNMNSVQPQIDNSMHSPIDDNLSHLLSDQPQMNQDLDVNPPTGEASPVKADIEPELCPQAVVKYYLHALENQRADQRKWKLKAKKHLLAEGWMFNYPTDNRKTTLYTSPQNQWLGTLRGACRLYIKEKIPEWTASGIPLNVSDIDEASADHVDDSDDLLHCVYQLLQKEPELHDIDGLPTIRPTGNRNNKHTRKSKAKFQRVLLPMRVLRTRKKVQQLSASSMEPKNPQNVLSWLIDNDMVLPRNKVFYRANGDKNTPEFEGRITHDGIKCMCCHKLYGPAGFVNHAGGGDNRMPSTSIFLKDGRSLFDCMVQVMCDHRTREIIETPGNNLLEGENDNVCTVCNYGGELILCDKCPSVFHKKCLNMEDIPDGDWFCPSCRCGICGQIKFEGTKYGDLITCVQCEHKYHVGCLKSRPDDQSTKYLEHWFCGKECEHVYASLHDILGKPVTVGEKNLTWTLIKWEDPKNGKVGSAKNDLLAETYSKLSVALSVMHECFEPLKNPFSNRDLVDDVLFNRWSELNRLNFQGFYTILLERNEEMISVATLRVFGEKVAELPLVGTRGRYRRNGMCGILMKELEKKLAELGVERLVLPAVPSVLDSWKNTFGFSEMTDFERAKFLDCAFLDFQGTIMCQKLLKRVPSPNSALIGETYPKEQQDGFSVKCRVKFDKSSSTSEVNET. 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01453 1214 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1051 1151 IPR016181 -
Seca7g01453 1214 MobiDBLite consensus disorder prediction 711 731 - -
Seca7g01453 1214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 917 971 IPR013083 -
Seca7g01453 1214 Gene3D - 1008 1176 - -
Seca7g01453 1214 Pfam Agenet domain 27 102 IPR008395 -
Seca7g01453 1214 SMART agenet_At_2 21 105 IPR014002 -
Seca7g01453 1214 SMART agenet_At_2 109 166 IPR014002 -
Seca7g01453 1214 SUPERFAMILY FYVE/PHD zinc finger 859 915 IPR011011 -
Seca7g01453 1214 CDD PHD2_CHD_II 874 914 - -
Seca7g01453 1214 Pfam Tify domain binding domain 797 848 IPR032308 -
Seca7g01453 1214 PANTHER PHD FINGER PROTEIN 12 588 1212 IPR042163 GO:0003714|GO:0045892
Seca7g01453 1214 MobiDBLite consensus disorder prediction 268 284 - -
Seca7g01453 1214 CDD NAT_SF 1066 1126 - -
Seca7g01453 1214 SMART PHD_3 874 915 IPR001965 -
Seca7g01453 1214 SMART PHD_3 916 968 IPR001965 -
Seca7g01453 1214 MobiDBLite consensus disorder prediction 268 294 - -
Seca7g01453 1214 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1010 1171 IPR000182 GO:0016747
Seca7g01453 1214 ProSiteProfiles Zinc finger PHD-type profile. 872 917 IPR019787 -
Seca7g01453 1214 MobiDBLite consensus disorder prediction 386 437 - -
Seca7g01453 1214 Pfam PHD-finger 875 916 IPR019787 -
Seca7g01453 1214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 866 916 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01453 Seca-Chr7 25713526 25720213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01453 23 243 PHD Transcription Factor Family AT5G58610 46.188 3.05e-59 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Seca7g01453 Agenet 2.7e-14 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01453 - - adu:107471457 1189.87