Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01445 ATGGCTAATTCGTGGGTGAGAGGCAAGTGTATCGGTAAGGGCGTGTTTGGCGTTGTGAACATAGCGGTTTCTAAACGTGATGGTCGGGTTTTCGCTGTGAAGTCCGTGGATCGGAAAACGGAGCTACCGGGTCAAGTTGAGGCGTTGGAGAACGAGATTCGGATCCTCCGTCGTATGTCTTCGCCTCATGTGGTAGCGTATCTCGGCGACGATGTCACTTGTGAAGGGGGTAAAACGTCGTCGTTCAGGAACCTTCATTTGGAGTACATGCCAGGTGGCACCGTCGCTGACGTGGACGCTGCTGACGTGGACGAATTGTTGGTGCGACGCTACGCGTGGTGCTTGGTGAACGCGCTGCAACACGTTCACGCTAGCGGCGTCGTGCACTGTGACGTGAAGGGGAGGAACGTTCTCGTCGACGGCGACGGCACAGCGAAGCTCGCTGACTTCGGCGCGGCGGTTGAATTCTCCGGCGGGAACTGTTCTGCACCGCGTGGAAGCCCTATGTGGATGGCGCCGGAGGTGATTCGCCGGGAGTATCAAGGACCGGAATCCGACGTGTGGTCTTTAGGATGCACGGTGATTGAGATGATCACCGGAAAACCGCCGTGGGAGGATCGCGGTATTGACACGCTGAGTCGAATCGGGTATTCCGACGAGTTGCCGGAGTTTCCGAGCGTGTTATCGGAGCTTGGACGCGATTTTATCGAGAAGTGTCTGAGGAGGGATTTTCGCCGGCGATGGAGCTGTGATCAGCTTCTTCAGCATCCATTTTTACTTCCCGATACGGTTGTGGAATCGTCACCTCGCTGCGTTTTGGACTGGGTTGACTCGTTGTTCACCGAGTCAGAAAACGAGTACGAAGAAGAAGAGGGGGTAATTTTGAACAGTGAAGAAAATCAAAATTCAGTGAAAAATAGGATTGGTAAATTGGCAACAAGTTCGAGGGCAAATTGGGAAACTGAGGGTTGGATGGTGGTGAGGGCAATAACATCCGACGCGGAAACAACATTAGAAAAAGGAACGGGAGCGTGCGATGGTGGGTTTGGGGGCGAAGAAGAAGGGGCAAAATGGGAATTTGAGAATGTTGTGAGGGTAGAAGAGGGAATTGAGGAAGGGACTGGTTTGGAATATTCGGAATCAGGAAGATTCGGAACAACGAGAAATGAAAGGGTAAAACGGGAAATGTGGAAGGGGTTGGTGCTGCGGCGTGAGTGTGATCAGTGCAACCGCAACCGCAAGGACAGCATCATAGCTGGAGGTGGTTATGGTTATGGTTGTGGTTGGTGCTGTCGGCATGAGCATGGGTGTGAAAAGCTTGATAGGAATATTATAGTAATATTCAGCATGTACATCTTGAGCTGTAAAATATTCAAATTATGTCATTTATTCTCATTAATATATTATCCTTTTCGATTATTTATGTTGCTTACTTTTTTTACTGCGTGTTATCAAATTAAACGGCTTATGTGTGAAGGGAAAATAAATTTAAAACAAAAAAATTAA 1506 0.4934 MANSWVRGKCIGKGVFGVVNIAVSKRDGRVFAVKSVDRKTELPGQVEALENEIRILRRMSSPHVVAYLGDDVTCEGGKTSSFRNLHLEYMPGGTVADVDAADVDELLVRRYAWCLVNALQHVHASGVVHCDVKGRNVLVDGDGTAKLADFGAAVEFSGGNCSAPRGSPMWMAPEVIRREYQGPESDVWSLGCTVIEMITGKPPWEDRGIDTLSRIGYSDELPEFPSVLSELGRDFIEKCLRRDFRRRWSCDQLLQHPFLLPDTVVESSPRCVLDWVDSLFTESENEYEEEEGVILNSEENQNSVKNRIGKLATSSRANWETEGWMVVRAITSDAETTLEKGTGACDGGFGGEEEGAKWEFENVVRVEEGIEEGTGLEYSESGRFGTTRNERVKREMWKGLVLRRECDQCNRNRKDSIIAGGGYGYGCGWCCRHEHGCEKLDRNIIVIFSMYILSCKIFKLCHLFSLIYYPFRLFMLLTFFTACYQIKRLMCEGKINLKQKN. 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01445 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Seca7g01445 501 FunFam Serine threonine protein kinase putative 3 312 - -
Seca7g01445 501 Gene3D Transferase(Phosphotransferase) domain 1 1 328 - -
Seca7g01445 501 SMART serkin_6 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01445 501 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01445 501 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 320 - -
Seca7g01445 501 CDD STKc_MAPKKK 4 259 - -
Seca7g01445 501 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Seca7g01445 501 SUPERFAMILY Protein kinase-like (PK-like) 3 278 IPR011009 -
Seca7g01445 501 ProSiteProfiles Protein kinase domain profile. 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01445 Seca-Chr7 25080400 25081905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01445 5 339 MAP Kinase Kinase Kinase AT2G30040 60.234 3.42e-132 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca7g01445 Pkinase 6.4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01445 - - tpra:123921217 560.066