Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01431 ATGCGTGGCTTGAAGGTTCGTGACATCCTCAATTCCTCAGAAACCACTGGTACTAGAAACAAAGCCACCGGGGGTGTCACCAGAATCAAATCATTGATTTCAAAGCCCAAATCCAACAACAACAACAACAACTCCACCTCAGCAATTGCAAACCTTGTTGTTCCTCTTCATCTCCCTTATGCTGATACTATTGAACCTTCCATAGAACCTTACCTTAAACCCATTAACCTCGTAGAGGCCTTAGCAGAACTTTATCACAGACTTGAGTGTTGCCCTCAATCCCAGAAAACATTACTGTGTGTGGAACAGTACTCGCTGCTGCGCAGCCTCGGAGACCAGAAGCTTCTCCGAAGATGTCTCAGGACAGCGCGCCAGAACGCTGAGGATGTTCTCTCTAAGGTTGTGTTGTCAGCATGGTTGAGGTTTGAGAGGAGGGAGGATGAGCTTGTGGGTGTTTCATCAATGGATTGTGGTGGTGGTGGTGGGTGCATTCTTGAATGTCCAAAGGTGAATTTGGTAAATGGGTTTAGTCCCTGTTCGATTAATGATAGGTGCCAGTGTTTCCAAGAGACTAAACAAGAAACTAGCACTGAAAGTGTGTGTTTGACAGATGAGGAAAATGATGTTTCTTTTTGCGTTGGTAATGAGGAAATCAATTGTGTTAGGTGGAGAATTGCAGCACTATCAGAGCCATTTAAGGCTATGCTATATGGTGGCTTTGCAGAGTCTAAAATGAGGAAGATTGATTTCACCCACAATGGGATATGCCCAAGGGGTATGAGGGCAGTGGAATTGTACAGCAGGGCTAAAAGATTGAACCTTTTCTGCCCCATGACTGTTTTGGAGCTTCTTTCCTTTGCCAATAGGTTCTGTTGTGAGGAGATGAAGTCTGCTTGTGAGGCTTATTTGGCTTCAAATGTTGGAAATGTTGATGATGCATTGGTACTTGTTGACTATGGATTGGAAGAGAGAGCCCCCCTTCTTGTTGCTTCCTGCTTACAAGTATTGCTTAGGGAACTGCCAAATTCTTTATATGATTCAAAGGTAATAAATATCTTCTGTAGTTCTGAGGCAAAGGAAAGGTTGGCCATTGTGGGGTATGATTCTTTCTTACTGTACTATTTCCTGAGCCAGGTGGCTATGGAGGAAAGCATGGTATCTAAAACTACTATGATGTTACTGGAAAGATTAGGGGAGTGTGCTGCTGAAAGATGGCAGAAGGCCCTAGCATTCCATCAATTGGGGTGTGTGCTGCTTGAAAGGAAAGAATATGAAGATGCACAGCATTGTTTTGAGGCTGCAGCTGAAGCAGGCCATGTGTATTCTTTGGCTGGTGTTGCCAGAACCAAGCATAAGCAAGGCCAACCATGTTCAGCCTATAAGTTAATTAGTTCTCTCATATTTGAGCATAAACCTGCTGGGTGGATGTATCAGGAGCGTGCTCTTTACAATATGGGAAATGAAAAAAGTGTTGACTTGGATGTTGCAACTGAATTGGACCCCTCCCTTTCATTTCCATATAAGTATAGAGCCCTGGCAAAGGTGGAGGAGAAGGAGATAAAGGCTGGGATTTTAGAGCTTGATAAAATTATTGGATTTAAGCTTTCCCCTGATTGCTTAGAATTGAGGGCTTGGTTGTTTATTGCACTTGAGGATTATGATGGTGCCATGAGAGATGTTAGGGCATTGTTAACTTTAGAACCAAATTATATAACTTCACATGGGAAGATCACAGGGAAATACTTGGTTCATCTCCTTAGCCATGTGGTACAGCAAAAGAGTCAAGCTGAATGCTGGATGCAATTATATGAACAATGGTCTTCTGTTGATGATGTTGGTTCTTTGGCTATTATACATCAGATGCTGGACAATGAGCCTGGAAAGAGCTTGCTGGAGTTTCGTCAGTCTCTACTCCTTTTGAGGTTAAACTGTCAAAAGGCTGCAATGCGCAGTTTGAGGATGGCCAGAAACCATTCTAGCTCAATGCAAGAAAGGTTAATTTATGAAGGATGGATTCTATATGATTCTGGCTATCGAGATGAAGCTCTGGCTAGAGCTGATAGGTCCATTTCAATTCAGAGATCATTTGAAGCCTTTTTTCTAAAAGCATATGTGTTAGCAGATACAAATCTGGATCCTGAATCTTCTTCTTTAGTTATCCAACTTCTGGAAGCAGCACTTCAATGTCCTTCAGATGGTCTTCGCAAAGGACAGGCACTAAATAACTTAGGGAGTATTTATGTGGATTGTGGTAAGCTTGAACTTGCAAAAGCATGCTACAAGAATGCCCTTGCAATCAGGCACACAAGAGCTCATCAAGGTCTAGCACGTGTTTATCATCAGAAAAATCAAAGAAAAGCTGCATATGATGAGATGACCAAGCTAATTGAGAAGGCAGAAAGCAATGCTTCAGCATATGAGAAACGATCAGAATACTGTGACCGCGAGATGGCAAAGGTTGATCTTGATGTAGCAACCCAACTTGATCCTTTAAGGACATATCCATATAGATACAGGGCAGCAGTGTTGATGGATGAGCAAAAAGAAACTGAAGCTGTAGAAGAGCTCACCAAGGCCATAAATTTCAAGCCTGACCTGCAAATGCTTCATCTTCGAGCAGCGTTTTATGAGTCAATGGGGGACCTCTCCTCTTCTCTTCAAGATTGTGGGGCAGCTTTATGCTTAGACCCTAACCATACAGACACCCTTGATCTGTATCAAAGGGCACAAAAGATGAGCTTTTAA 2745 0.427 MRGLKVRDILNSSETTGTRNKATGGVTRIKSLISKPKSNNNNNNSTSAIANLVVPLHLPYADTIEPSIEPYLKPINLVEALAELYHRLECCPQSQKTLLCVEQYSLLRSLGDQKLLRRCLRTARQNAEDVLSKVVLSAWLRFERREDELVGVSSMDCGGGGGCILECPKVNLVNGFSPCSINDRCQCFQETKQETSTESVCLTDEENDVSFCVGNEEINCVRWRIAALSEPFKAMLYGGFAESKMRKIDFTHNGICPRGMRAVELYSRAKRLNLFCPMTVLELLSFANRFCCEEMKSACEAYLASNVGNVDDALVLVDYGLEERAPLLVASCLQVLLRELPNSLYDSKVINIFCSSEAKERLAIVGYDSFLLYYFLSQVAMEESMVSKTTMMLLERLGECAAERWQKALAFHQLGCVLLERKEYEDAQHCFEAAAEAGHVYSLAGVARTKHKQGQPCSAYKLISSLIFEHKPAGWMYQERALYNMGNEKSVDLDVATELDPSLSFPYKYRALAKVEEKEIKAGILELDKIIGFKLSPDCLELRAWLFIALEDYDGAMRDVRALLTLEPNYITSHGKITGKYLVHLLSHVVQQKSQAECWMQLYEQWSSVDDVGSLAIIHQMLDNEPGKSLLEFRQSLLLLRLNCQKAAMRSLRMARNHSSSMQERLIYEGWILYDSGYRDEALARADRSISIQRSFEAFFLKAYVLADTNLDPESSSLVIQLLEAALQCPSDGLRKGQALNNLGSIYVDCGKLELAKACYKNALAIRHTRAHQGLARVYHQKNQRKAAYDEMTKLIEKAESNASAYEKRSEYCDREMAKVDLDVATQLDPLRTYPYRYRAAVLMDEQKETEAVEELTKAINFKPDLQMLHLRAAFYESMGDLSSSLQDCGAALCLDPNHTDTLDLYQRAQKMSF. 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01431 914 Pfam BTB/POZ domain 207 305 IPR000210 GO:0005515
Seca7g01431 914 SMART BTB_4 207 307 IPR000210 GO:0005515
Seca7g01431 914 Gene3D Potassium Channel Kv1.1; Chain A 196 344 IPR011333 -
Seca7g01431 914 SUPERFAMILY TPR-like 539 867 IPR011990 GO:0005515
Seca7g01431 914 Coils Coil 782 809 - -
Seca7g01431 914 Gene3D Tetratricopeptide repeat domain 401 603 IPR011990 GO:0005515
Seca7g01431 914 Gene3D Tetratricopeptide repeat domain 813 913 IPR011990 GO:0005515
Seca7g01431 914 Pfam Tetratricopeptide repeat 738 766 IPR019734 GO:0005515
Seca7g01431 914 SUPERFAMILY TPR-like 408 655 IPR011990 GO:0005515
Seca7g01431 914 PANTHER ETO1-RELATED 6 912 IPR044631 GO:0010105
Seca7g01431 914 Gene3D Tetratricopeptide repeat domain 633 801 IPR011990 GO:0005515
Seca7g01431 914 SMART tpr_5 408 441 IPR019734 GO:0005515
Seca7g01431 914 SMART tpr_5 833 866 IPR019734 GO:0005515
Seca7g01431 914 SMART tpr_5 867 899 IPR019734 GO:0005515
Seca7g01431 914 SMART tpr_5 737 770 IPR019734 GO:0005515
Seca7g01431 914 SMART tpr_5 537 570 IPR019734 GO:0005515
Seca7g01431 914 SUPERFAMILY POZ domain 200 305 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01431 Seca-Chr7 24649387 24655555 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01431 738 898 Glycosyltransferase AT3G04240 26.901 6.87e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Seca7g01431 BTB 3.9e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01431 - - gmx:100800568 1528.84