Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01429 ATGTTATTTTTTGCAGCTGTTAAGGGGAAGGGATTCATTGCCAAAAACATCAAGTTTGTGAACACTGCATGTGCATCTAAGCACCAGGCTGTGGCATTGCGTTCTGGCTCAGATGGCTTAGTGTTTTACAGGTTCTCATTTGATGGCTTTCACGACACCCTTTATGCATATTCCATGCGCCAGTTTACCGTGAGTGTGAAATTACAGGCACCATAG 216 0.4398 MLFFAAVKGKGFIAKNIKFVNTACASKHQAVALRSGSDGLVFYRFSFDGFHDTLYAYSMRQFTVSVKLQAP. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01429 71 Pfam Pectinesterase 6 66 IPR000070 GO:0030599|GO:0042545
Seca7g01429 71 SUPERFAMILY Pectin lyase-like 6 63 IPR011050 -
Seca7g01429 71 Gene3D - 3 68 IPR012334 -
Seca7g01429 71 PANTHER PECTINESTERASE 6 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01429 Seca-Chr7 24644059 24644274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01429 6 62 Carbohydrate Esterase AT1G53840 66.667 2.64e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01429 - - lja:Lj3g3v2575530.1 92.8189