Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01428 ATGGATAACAATAAACTCCCTTATGTTACTTCAACACCAAACCTGAACGTGAAATCGAAACAACCATTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCCAGACTCAACTAGCTTGAACAATGACATTATTGAGATTCCTAATAATCCTCCTGGAAATACAAGCCACAAGCGCGCTCGATCTGAGATTCTCACCCTCCCTGAAGACATCAACGTCGACGGTGATATCGACACCACGAATGGCCTCTCACTTTTTGATGACACTGTTGAGGGAGTCTTGCTTTCCGTCTACCTCAATATGTATAAACTAAACTCATCCTCTGGAGGCCATGATACTGTTGTAGAAAACTTTGCTATTGATATTGGTAATACCAATATTAATGAAAGGCTCGAGGTTGGGCACCGGCATAGCCAGTCCATAAATGGATCAACATCCATCATCAAACCTGACATTCCGGTCTCTGCTTCTAGAAATGAATCTATGATTGCCTCAAGGAAAGCAATGTCCGCTGGAGAACTTGTAGAGCTTTCCAAGGTTGATCCTAAGCGTCTTGAAAGGTCTCAAGTTGCTTGGTTGGCAATGGATAATAACAAAATCCCTTATGTTACTTCAACACCAAAACTGAATGTGAAATCGAAACAACAACTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCTAGACTCAACTAGCTTTAACAATGGCATTAGTGAGATGTCTAATAATCCTCCTAAAGATATCAACATCGAGGGTGATATTGACACCATGGATGGCCTCTCACTTTTTGATGACACCGTTGAGGAAGACTTGTTTTCCGTCTACCTGGATATGAATAAACTAAACCCATCCTCTGGAGCCCATGATACTATTGTAGAAAACTTTGCTATTGATATTGGTAATACCACTATTAATGAAAGGCTCGAGGTTGGGCACCAACACAGCCAACCCATAAATGGATCAACATCCATCATCAAACCTGACATTCCGGTTTCTGCTTCTGAAAATGGATCTATGATTTCCTCAAGGAAAGCAATGTCCGCTAGAGAACTTGTAGAGTGCGCCAAGGTTGATCCTAAGCATACTGAAAGGTGTCAAGTTGGTTGGTTGGCAATGGATAACAATAAACTCCCTTATGTTACTTCAACACTAAACCTGAACGTGAAATCGAAACAACCATTATCGTCATCATCATCGTATCTTCCACCAACAGTTCTAGCTACAACCCCAGACTCAACTAGCTTGAACAATGACATTAGTGAGATGCCTAATAATCCTCCTGGAAATACAAGCCACAAGCGCGCTCGATCTAAGATTCTCACCCTCCCTGAAGATATCAATATCGACAGTGATATTGACCCCATGGATGGCCTCTCACTTTTGGATGACACCGTCGAGGAAGACTTCTTTTCCGCCTACGTCAATATAGATAAACTAAACCCATCCTCTGGAGCCCATGCTACTGTTGTAGAAAACTTTGCTATTGATATTGGTAGTACCAATATCAATGAAAGGCTCGAGGTTGGGCACCAACATAGCCAATCCATAAATGGATCAACATCCACCATCAAACCTGACATTCCGATCTCTGCTTCTGAAAATGGCTCTATGATTGCCTCAAGGAAAGTAATGTCTGCTGTCAAACTTGTAGAGCTTGCAAAGGTTGATCCTAAGCATGCTGAAAGGATATGGGCAAATAGACAGTCTGCTGCAAGATCAAAGGAAAAGAAGACACGTTACATTTTTGAGCTTGAAAATAAGGTTCAAAAATTGGAAACTGAAGCTACATCCTTATCTACACAATTAACTATCTTGCAGAGGGATACACAAAGAATGGCTACTAAGAATGATGAGTTAAGGTTGCAGATGCAAACCAAGCAACAACAACTTCAATTGCAAAAAGCATTGAAGAACTCATCTGGAGAGGAAATCCGACATTGGTCACTACTAATTAGGCAAGCTATGCCAAATGGAAGACCTATGAACTCGGTTGCATTTGGAAGGGGGCAACAATATTCTCGTAAAACACAGGACACACATGCTCTTTTAGCAGCACAACAGTTACAACAACCTCAAAGTCATTCCCAGATGCAGCATCACCAACTTCAGTAG 2139 0.4151 MDNNKLPYVTSTPNLNVKSKQPLSSSSSYPPPTILATTPDSTSLNNDIIEIPNNPPGNTSHKRARSEILTLPEDINVDGDIDTTNGLSLFDDTVEGVLLSVYLNMYKLNSSSGGHDTVVENFAIDIGNTNINERLEVGHRHSQSINGSTSIIKPDIPVSASRNESMIASRKAMSAGELVELSKVDPKRLERSQVAWLAMDNNKIPYVTSTPKLNVKSKQQLSSSSSYPPPTILATTLDSTSFNNGISEMSNNPPKDINIEGDIDTMDGLSLFDDTVEEDLFSVYLDMNKLNPSSGAHDTIVENFAIDIGNTTINERLEVGHQHSQPINGSTSIIKPDIPVSASENGSMISSRKAMSARELVECAKVDPKHTERCQVGWLAMDNNKLPYVTSTLNLNVKSKQPLSSSSSYLPPTVLATTPDSTSLNNDISEMPNNPPGNTSHKRARSKILTLPEDINIDSDIDPMDGLSLLDDTVEEDFFSAYVNIDKLNPSSGAHATVVENFAIDIGSTNINERLEVGHQHSQSINGSTSTIKPDIPISASENGSMIASRKVMSAVKLVELAKVDPKHAERIWANRQSAARSKEKKTRYIFELENKVQKLETEATSLSTQLTILQRDTQRMATKNDELRLQMQTKQQQLQLQKALKNSSGEEIRHWSLLIRQAMPNGRPMNSVAFGRGQQYSRKTQDTHALLAAQQLQQPQSHSQMQHHQLQ. 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01428 712 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 24 191 - -
Seca7g01428 712 SMART brlzneu 563 627 IPR004827 GO:0003700|GO:0006355
Seca7g01428 712 SUPERFAMILY Leucine zipper domain 567 618 IPR046347 GO:0003700|GO:0006355
Seca7g01428 712 Coils Coil 583 617 - -
Seca7g01428 712 MobiDBLite consensus disorder prediction 401 442 - -
Seca7g01428 712 Coils Coil 625 645 - -
Seca7g01428 712 Pfam bZIP transcription factor 567 625 IPR004827 GO:0003700|GO:0006355
Seca7g01428 712 Gene3D - 567 621 - -
Seca7g01428 712 MobiDBLite consensus disorder prediction 323 351 - -
Seca7g01428 712 MobiDBLite consensus disorder prediction 1 44 - -
Seca7g01428 712 CDD bZIP_plant_RF2 569 617 IPR044759 GO:0003700|GO:0006355
Seca7g01428 712 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 565 628 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01428 Seca-Chr7 24592486 24599573 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01428 403 694 bZIP Transcription Factor Family AT1G06070 46.429 1.16e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g01428 bZIP_1 1.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01428 - - pcin:129313665 258.455