Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01418 ATGGATAACAATAAACTCCCTTATGTTACTTCAACACCAAACCTGAACGTGAAATCGAAACAACCATTATCATCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCCAGACTCAACTAGCTTGAACAATGACTTTATTGAGATGCCTAATAATCCTCCTGGAAATACAAGCCACAAGCGCGCTCGATCTGAGATTCTCACCCTCCCTGAAGACATCAACATCGATGTTGATATCGACACAACAAATGGCCTCTCACTTTTTGATGACACTGTTGAGGGAGTCTTGCTTTCTGTCTACCTCGATATGTATAAACTAAACTCATCCTCTGGAGGCCACGATACTGTTGTAGAAAACTTTGCTATTGATATTGGTAATACCAGTAGTAATGAAAGGCTCGAGGTTGGGCACCGACATATCCAGTCCATAAATGAATCAACATCCATCATCAAACCTGACATTCCGGTCTCTGCTTCTAGAAATGGATCTATGATAGACTCAAGGAAAGCAATGTCCGCTAGAGAACTTGTAGAGCTTGCCAAGGTTGATCCTAAGCGTCTTGAAAGGTCTCAAGTTGGTTGGTTGGCAATGGATAACAACAAACTCCCTTATGTTACTTCAACACCAAACTTGAATTTTAAATCAAAACAACCACTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCTAGACTCAACTAGCTTGAACAATGAAATTAATGAGATGTCTAATAATCCTCCTGGAAATACAAGCCACAAGAGCGCTCGATCTGAGATTTTCACCCTCCCGAAAGATATCAACATCGAGGGTGATATTGACACCATGGATGGCCTCTCACTTTTTGATGACACCGTTGAGGAAGACTTGACTTCCATCTACCTCAATATGAATAAACTAAACCCATCCTCTGGAGCCCATGATAATATTGTAGAAAACTTTGCTATTGATATTGGTAATACCACTATTAATGAAAGGCTCAAGGTTGGGCACCAACACAGCCAACCTATAAATGGATCAGCATCCACCATCAAACCTGACATTTCAGTTTCTGCTTCTGAAAATGGTTCTATGATTTCCTCAAGGAAAGCAATATTGTCCGGTGGCAAACTTGTAGAGTGCGCCAAGGTTGATCCTAAGCATGCTAAAAGGTGTCAAGTTGGTTGGTTGGCAATGGATAACAATAAACTCCCTTATGTTACTTCAACACTAAACCTGAATGTGAAATCGAAACAACCATTATCGTCATCATCATCGTATCCTCCACCAACAGTTCTAGCTACAACCCCAGCCTCAACTAGCTTGAACAATGACATTAGTGAGATGCCTAATAATCCTCCTGGAAATACAAGCCAAAAGCGCGCTCGATCTGAGATTCTCACCCTCCCTGAAGATATCAATATCGACAGTGATATTGACCCCATGGATGGCCTCTCATTTTTTGATGACATCGTCGAGGAAGACTTGTTTTCCGCCTACGTCAATATGGATAAACTAAACACATCCTCTGGAGCCCATGCTACTGCTGTAGAAAACTTTGCTATTGATATTGGTAGTACCAATATCAATGAAAGGCTCGAGGTTGGGCACCAACATAGCCAATCCATAAATGGATCAACATCCACCATCAAACCTGACATTTCGGTCTCTGCTTCTGAAAATGGCTCTATGATTGCCTCAAGGAAAGTAATGTCCGCTGCCAAACTTGTAGAGCTTGCAAAGGTTGATCCTAAGCGTGCTGAAAGGATATGGGCAAATAGACAGTCTGCTGCAAGATCAAAGGAAAAGAAGGCACGTTACATTTTTGAGCTTGAAAATAAGGTTCAAAAATTGGAAACTGAAGCTACATCCTTGTCTACACAATTAACTATCTTGCAGAGGGATACACAAAGAATGGATATTAAGAATGATGAGTTAAGGTTGCAGTTGCAAACCAAGAGACAACAACTTCAATTGCAAAAAGCATTGAAGAACTCATCTGGAGAGGAAATCCGACACTGGTCACTACTAATTGGGCAAGCTATGCCAAATGCAGGACCTATGAACTCTGTTGCATTTGGAAGGGGGCAACAATACTCTCCTAATACACAAGACACATATGCTCTTTTAGTAGCGCAACAGTTACAACAACCTCAAAGTAATTCCCAGATGCAGCATCACCAACTTCAGTAG 2190 0.4132 MDNNKLPYVTSTPNLNVKSKQPLSSSSSYPPPTILATTPDSTSLNNDFIEMPNNPPGNTSHKRARSEILTLPEDINIDVDIDTTNGLSLFDDTVEGVLLSVYLDMYKLNSSSGGHDTVVENFAIDIGNTSSNERLEVGHRHIQSINESTSIIKPDIPVSASRNGSMIDSRKAMSARELVELAKVDPKRLERSQVGWLAMDNNKLPYVTSTPNLNFKSKQPLSSSSSYPPPTILATTLDSTSLNNEINEMSNNPPGNTSHKSARSEIFTLPKDINIEGDIDTMDGLSLFDDTVEEDLTSIYLNMNKLNPSSGAHDNIVENFAIDIGNTTINERLKVGHQHSQPINGSASTIKPDISVSASENGSMISSRKAILSGGKLVECAKVDPKHAKRCQVGWLAMDNNKLPYVTSTLNLNVKSKQPLSSSSSYPPPTVLATTPASTSLNNDISEMPNNPPGNTSQKRARSEILTLPEDINIDSDIDPMDGLSFFDDIVEEDLFSAYVNMDKLNTSSGAHATAVENFAIDIGSTNINERLEVGHQHSQSINGSTSTIKPDISVSASENGSMIASRKVMSAAKLVELAKVDPKRAERIWANRQSAARSKEKKARYIFELENKVQKLETEATSLSTQLTILQRDTQRMDIKNDELRLQLQTKRQQLQLQKALKNSSGEEIRHWSLLIGQAMPNAGPMNSVAFGRGQQYSPNTQDTYALLVAQQLQQPQSNSQMQHHQLQ. 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01418 729 MobiDBLite consensus disorder prediction 417 459 - -
Seca7g01418 729 Coils Coil 642 662 - -
Seca7g01418 729 MobiDBLite consensus disorder prediction 1 39 - -
Seca7g01418 729 Gene3D - 583 639 - -
Seca7g01418 729 CDD bZIP_plant_RF2 585 636 IPR044759 GO:0003700|GO:0006355
Seca7g01418 729 SUPERFAMILY Leucine zipper domain 584 637 IPR046347 GO:0003700|GO:0006355
Seca7g01418 729 Coils Coil 600 634 - -
Seca7g01418 729 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 582 645 IPR004827 GO:0003700|GO:0006355
Seca7g01418 729 SMART brlzneu 580 644 IPR004827 GO:0003700|GO:0006355
Seca7g01418 729 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 25 191 - -
Seca7g01418 729 Pfam bZIP transcription factor 584 638 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01418 Seca-Chr7 24368822 24376471 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01418 420 711 bZIP Transcription Factor Family AT1G06070 47.727 8.31e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g01418 bZIP_1 1.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01418 - - pcin:129313665 270.011