Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01414 ATGGATAACAATAAACTCCCTTATGTTACTTCAACACCAAACCTGAACGTGAAATCGAAACAACCATTATCGTCATCATCATCGTATCCTCCACCAACAATTCAAGCTACAACCCCAGACCCAACTAGTTTTAACAATGACATTAGTGAGATGCCTAATGATCCTCCTGGAAACACAAGCCACAAGCGTGCTCGATCTGAGATTCTCACCCTCCCTGAAGATATCAACATCGACGGTGATATTGACACCACGAATGTCCTCTCACCTTTTGATCTCACTGTTGAGGAAGTCTTGTTTTCCGTCTACCTCAATATGGATAAACTAAACCGATCCTCTAGAGGCCATGATACTGGTGTAGAAAACTTTGCTATTGATATTGGTAATACCAATGTTAACGAAAGGCTCGAGGTTGGGCACCGACATAGCCAGTCCATAAATGGATCAACATCCATCATCAAACCTGACATTCCAGTCTCTGCTTCTAAAAATGGATCTATGATTGCCTCAAGGAAAGCAATGTCCGCTGATGAACTTGTAGAGCTTTCCAAGGTTGATCCTAAGCGTCCTGAAAGGTCTCAAGTTGGTTGGTTGGCAATGGATAACAACATACTCCATTATGTTACTTCAACACCGAACCTGAACGTGAAATCAAAACAACCACTATTGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCCAAACTCAACTAGCTTGAACAATGACATTAGTGAGATGTCTAATAATTCTCCTGGAAATACAAGCCACAAGCACGCTCGATTTGAGATTTTCACCCTCCCAAAAGATATCAACATCGAGGGTGATATCGACACCATGGATGGCCTCTCACTTTTTGATGACACCATTGAGGAAGACTTGTTTTCTGTCTACCTCAATATGAATAAACTAAACCCATCCTTTGGAGCCCATGATACTGCTGGAGAAAACTTTGCTATTGATATTGGTAATACCAATATTAATGAAAGGCTCAAGGTTGGGCACCAACACAGCCAGTCCATAAATGGATCAAAATCCATCATCAAGCCTGACATTCCGGTCTCTGCTTCTGAAAATGGATCTATGATTGCCTTAAGGAAAGCAATGTCCACTAGCGAACTTGTTGAGTGTGCCAAGGTTGATCCTAAGCGTGCTGAAAGGTGTCAAGTTTGTTGGTTGGCAATGGATAACAATAAACTCCCTTATGTTACTTCAATACCAAACTTGAATGTGAAATCGAAACAACCATTATCGTCATCATCATCGTATCCTCCACCAACAATTCTATCTACAACCCCAGACTCAAGTAGCTTGAACAATGACATTAGTGAGATGCCTAATTATCCTCCTAGAAATACAAGCCACAAGCGTGCTCGATCTGAGATTGTAGAAAACTTTGCTATTGATATTGGTAATACCGGTATCAATGAAAGGCTCGAGGTTGGGCACCGACATAGCCAATCCATAAATGGATCAACATCCACCATCAATCCTGATATTCCGGTCTATGCTTCTAAAAATGGCTCTATGATTGCCTCAAGGAAAGTAATGTCCGCTGCCGAACTTGTAGAGCTTGCAAAGGTTGATCCTAAGCGTGCTAAAAGGATATGGGCAAATAGACAATCTGCTGCAAGATCAAAGGAAAAGAAGACACGTTACATTTTTGAGCTTGAAACTAAGGTGCAAAAATTGGAAACTGAAGCTACATCCTTGTCTACACAATTAACTATCTTGCAGAGGGTTACACAAAGAATGGCTACTAAGAATGATGAGTTAAGGTTGCAGTTGCAAACCAAGCAACAACAACTTCAATTGTAA 1824 0.4106 MDNNKLPYVTSTPNLNVKSKQPLSSSSSYPPPTIQATTPDPTSFNNDISEMPNDPPGNTSHKRARSEILTLPEDINIDGDIDTTNVLSPFDLTVEEVLFSVYLNMDKLNRSSRGHDTGVENFAIDIGNTNVNERLEVGHRHSQSINGSTSIIKPDIPVSASKNGSMIASRKAMSADELVELSKVDPKRPERSQVGWLAMDNNILHYVTSTPNLNVKSKQPLLSSSSYPPPTILATTPNSTSLNNDISEMSNNSPGNTSHKHARFEIFTLPKDINIEGDIDTMDGLSLFDDTIEEDLFSVYLNMNKLNPSFGAHDTAGENFAIDIGNTNINERLKVGHQHSQSINGSKSIIKPDIPVSASENGSMIALRKAMSTSELVECAKVDPKRAERCQVCWLAMDNNKLPYVTSIPNLNVKSKQPLSSSSSYPPPTILSTTPDSSSLNNDISEMPNYPPRNTSHKRARSEIVENFAIDIGNTGINERLEVGHRHSQSINGSTSTINPDIPVYASKNGSMIASRKVMSAAELVELAKVDPKRAKRIWANRQSAARSKEKKTRYIFELETKVQKLETEATSLSTQLTILQRVTQRMATKNDELRLQLQTKQQQLQL. 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01414 607 MobiDBLite consensus disorder prediction 1 63 - -
Seca7g01414 607 MobiDBLite consensus disorder prediction 415 452 - -
Seca7g01414 607 CDD bZIP_plant_RF2 534 582 IPR044759 GO:0003700|GO:0006355
Seca7g01414 607 Coils Coil 549 583 - -
Seca7g01414 607 SUPERFAMILY Leucine zipper domain 533 587 IPR046347 GO:0003700|GO:0006355
Seca7g01414 607 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 28 189 - -
Seca7g01414 607 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 531 594 IPR004827 GO:0003700|GO:0006355
Seca7g01414 607 Pfam bZIP transcription factor 533 591 IPR004827 GO:0003700|GO:0006355
Seca7g01414 607 MobiDBLite consensus disorder prediction 415 458 - -
Seca7g01414 607 SMART brlzneu 529 593 IPR004827 GO:0003700|GO:0006355
Seca7g01414 607 Gene3D - 532 589 - -
Seca7g01414 607 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01414 Seca-Chr7 24294469 24300075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01414 478 607 bZIP Transcription Factor Family AT1G06070 59.231 4.32e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g01414 bZIP_1 6.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01414 - - atri:130807888 150.599