Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01411 ATGGCCGCAGCTTTGGAGTGTTGGTCTAGCCGCACCACCACCAACAACACCGATGATGACACGGTGGAACAAGTCCTTATGAGGACCCACCACAGATCCGAGTCTCTTCCTTCTTCCTCTTCATCTTCTTCCACTACCAAAGACTCACCTACCTCCGTCCACAAAAAGTTGCAGAAGCTGAGTCGCAACCTCTCTGATGCCATTTCCTCTTTCAAAAACTCCCTTAACCTTAACCTTAACCCCAATGATCCTCCCCCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCCAAGAAACTTGCTTGGGCCACCGTTCTCCGTAACCTCACTCATCTCTACCCTGGAACCCAGCTCCCTGATAACCTCATCTCCAACATTCGCAACCATTACCATTCCCTCCCTCTCAGGTATACATTTTTGTTTGTTTACAGTTATGCACAGGCTGAATTTGATATGAAGGACGTGTTTCTTCACATCAAGTTGATGGAGCAGGCATTGGAGAGTGACCAGCCTGCTATTTTGATTCAGGAAGAGTCTGATGATGATGGTGAGGTTCATCAGGGGTCTGCGTTGAAGCTCACTTTTGCTTGCAACTCTCAGATTTCATGGCCTGCAATGTCTGGTGCTTTGGACAGTTTTTCCATTTGCTGCAAGAGGTTGCAGATCTTTGAGAAGAAAGGTTTTACCTTGGGGGTTGTTCTTCTTGTTGTTCGTTCTGGGCATGATAAATTGGTCAGGACCCGGGTTGAAAATGCTCTGAAGTTTGCTATGAAAAAGCCTAAAACTAGTGCTGTGAATGTCAAGCTTCCCTTTGGGCTTTGTGGGTGTCAGGAAGAGAATTACAAGGGGAGAGAACTTGGGGAGATTAGAGAAGACAGTGGAGGTGGTGGTGGTGGAAAGGAGTTTGAGAATTCAAGCCAAAAGATTCAGCTTCAGGTGCCTTTGCCTACTTCATCTTTCATTGTATCAGTGGATGAATGGCAGACTATAAAATCAGGTGGGGATGAGATTGAGAAATGGTTGTTGAACTCAGATAGTGTTGAGTTTACTGAACAGATTGGACCTAATTCTTATAAGGGGGTGTACATGGGGAAAAGGGTTGGAATTGAGAAGCTGAAAGGGTGTGAGAAAGGAAATTCTTATGAGTTTGAGCTTCACAAAGATCTGTTGGAACTGATGACTTGTGGGCATAGAAACATTCTGCAATTCTATGGTATCTGTGTGGATGATAATCATGGGTTGTGTGTGGTGACTAAGTTCATGGAAGGTGGATCTGTTCATGACTTGATGTTGAAGAACAAGAAGCTTCAGACTAAGGATGTTGTAAGAATTGCAATTGATGTAGCTGAGGGGCTTAAGTTTATGAATGACCATGGTGTTGCATACAGAGATCTTAATACACAGAGGATTCTATTGGATAGGCATGGGAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAATGTTGGTGAAGCAATGGAGTATGAAACTGATGGTTTTAGGTGGCTAGCTCCAGAGATAATTGCAGGGGACCCAGAGAGTGTCACAGAGACATGGATGAGCAATGTTTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCTTATTCTGCATTTTCACCTGTACAAGCAGCAGTGGGCATTGCTGCTTGTGGCCTTAGACCTGAAATCCCCAAGGATTGCCAACAAAATCTAAAATATATCATGACAAAGTGCTGGAACAACACCCCTTCCAAACGTCCTCAATTCTATGAAATTTTAGCCATATTGCTGCGACCAATCAACAACAATAGGTAA 1815 0.4408 MAAALECWSSRTTTNNTDDDTVEQVLMRTHHRSESLPSSSSSSSTTKDSPTSVHKKLQKLSRNLSDAISSFKNSLNLNLNPNDPPPSSSSSSPSSSKKLAWATVLRNLTHLYPGTQLPDNLISNIRNHYHSLPLRYTFLFVYSYAQAEFDMKDVFLHIKLMEQALESDQPAILIQEESDDDGEVHQGSALKLTFACNSQISWPAMSGALDSFSICCKRLQIFEKKGFTLGVVLLVVRSGHDKLVRTRVENALKFAMKKPKTSAVNVKLPFGLCGCQEENYKGRELGEIREDSGGGGGGKEFENSSQKIQLQVPLPTSSFIVSVDEWQTIKSGGDEIEKWLLNSDSVEFTEQIGPNSYKGVYMGKRVGIEKLKGCEKGNSYEFELHKDLLELMTCGHRNILQFYGICVDDNHGLCVVTKFMEGGSVHDLMLKNKKLQTKDVVRIAIDVAEGLKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKNVGEAMEYETDGFRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSAFSPVQAAVGIAACGLRPEIPKDCQQNLKYIMTKCWNNTPSKRPQFYEILAILLRPINNNR. 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01411 604 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 596 - -
Seca7g01411 604 ProSiteProfiles Protein kinase domain profile. 346 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01411 604 MobiDBLite consensus disorder prediction 1 58 - -
Seca7g01411 604 Gene3D Transferase(Phosphotransferase) domain 1 339 601 - -
Seca7g01411 604 SUPERFAMILY Protein kinase-like (PK-like) 327 596 IPR011009 -
Seca7g01411 604 MobiDBLite consensus disorder prediction 7 22 - -
Seca7g01411 604 Pfam Protein tyrosine and serine/threonine kinase 381 595 IPR001245 GO:0004672|GO:0006468
Seca7g01411 604 MobiDBLite consensus disorder prediction 75 95 - -
Seca7g01411 604 PRINTS Tyrosine kinase catalytic domain signature 417 430 IPR001245 GO:0004672|GO:0006468
Seca7g01411 604 PRINTS Tyrosine kinase catalytic domain signature 523 545 IPR001245 GO:0004672|GO:0006468
Seca7g01411 604 PRINTS Tyrosine kinase catalytic domain signature 567 589 IPR001245 GO:0004672|GO:0006468
Seca7g01411 604 PRINTS Tyrosine kinase catalytic domain signature 453 471 IPR001245 GO:0004672|GO:0006468
Seca7g01411 604 MobiDBLite consensus disorder prediction 31 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01411 Seca-Chr7 24188567 24192912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01411 329 596 MAP Kinase Kinase Kinase AT2G17700 33.091 2.31e-51 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Seca7g01411 PK_Tyr_Ser-Thr 3.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01411 - - pvu:PHAVU_008G258400g 957.592