Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01403 ATGGCTGAGGTTTTACTTGGACCTGTGTTTGAGAAGTTGCTCTCTATGGTTGAGAATGAATTTGCAACCATGACTGGAATCAAGGAAAAGGCTAAAAAGTTATTAAGCACTTCAAAGCTGATCAAGGCCGTCCTTGAAGATGCTGAGCAGAAACAAATGACAGACAAACCTGTAAAGGTTTGGCTGCAGGAACTCAAAGATGCTGTGTATGTGTTAGATGATATCCTTGATGAATGCTCCATTGAATCTCATCGACTTATGGGTCCATCCTCTTTCAAACCAAGGAACATCGTGTTTCGTTATAGGATTGGCAACAAGTTAAAAATGATTTCAAGGAGATTTGATGAAATTGCTGAAAGTAAAAACAAATTTCTTCTGAGATCAGAGCATGTTGGGGAAAGGTCAGGTGGAGATCGTGACCGTGGAGTGGCAGACTGGCGTGAAACCGGCATAACCATTGGCCAAAGTCAGATATATGGACGTGATGATGATAAAGAGAAGATTGTGGAGTTTCTTCTCAACCAAGCACGTGCCTCTGACTCACTTTCCATCTATGCCATCGTTGGCTTAGGTGGTGTTGGAAAGACAACGCTTGCTCAAATGGTCTACAATGATTATCGGGTAAGTAGTACTTTTAACACAATAATTTGGATTTGTGTTTCAGAGGTTTTCTCTGTCAAGAGGATTTTGTGTTCTATTATAAGATCTATCAACAAAGAGACAAAGTGTGATGACTGGGATTTAGCTAAAATAGAAACAGAAGTGCAGGAATTGTTGCAAAGTAAAACATACTTGCTTGTTCTTGATGATGTGTGGAAAATGAATGATGAATTGAAATCCGGATTAACCCAAGACAAGTGGAACAAGTTGAAACCCGTGTTATCATGTGGATCCAAAGGTGCTTCTATTTTGGTATCCACTCGCGATAGAGATGTTGCAACAATCATGGAAACATGTCTAGCTCATCATTTGTCCGGTCTCTCTGAGGATGAATGTTGGTTGTTATTCAAACAATGTGCATTTGCTAACAGAAAAGAGTGTGAAGAGCTTGTAGCTATAGGCAAGGAGATAGTAAAGAAGTGTGGGGGATTGCCTCTTGCAGCACAAGCATTAGGAGGTTTATTGTGCTCAAAAAGTGAGGAAAAGGAGTGGCTTGAAGTCAAAGAAAGTAGGCTTTGGACTTTACGAGATGAAAATTCTATTTTGCCTGCCTTGAGGTTGAGCTACTGTTATTTAACTCCGACCTTAAAACAATGTTTTGCTTTTTGTGCCATATTTCCCAAAGATTCAGTAATCAAGAAGGGAGATCTCATTCACCTTTGGATGGCCAATGGGTTTATTTCATCCCAAGGAAGCTTGGAGGTAGAAGATGATGGCAATATGATTTGGAATGAACTGCACCAAAAATCATTCTTCCAAGATATCAAGATCAATTATAAAGGAGACATTTCTTTCAAGATGCATGATCTTATCCATGATCTTGCTCAGTCAGTTATGGGGTCAGAGTGTATGGTTATGGATAATTCAAATGTGACTGATTTATCAAGAAGCACACACCATATTCAATATGGCTCTAATGAGGATCGTGACGCAAGGTTTTATTTTTATATGACTCATGCGAATGAGGGAGTTTTTAAGAAAATTGAATCCTTGCGAACATTATATGACTCAAGGTTTTATATTTTCGAGGATTTTAACACAAGGTTTTTAAGTTGCTTTCATTCTCTTCGGGTTTTAAGGACTAGTTCTTCCAAATTATTATCATCACTTGCAAATTTAATTCATTTGAGGTATTTGCAGCTTGATCGTTTATTGCTGGTAGAAACCCTTCCTGAGTCAATCTATAGTCTGCGGAAATTGGAAATATTGAAATTGCAAAAACTTTATAGTCTTTTGTGTCTACCAAAACACTTGACTTGCTTACAAAATCTCAGACATCTCATTGTTAAAGATTGTATATCGTTGTCTCGTACCTCTCCTAACATGAGAAAATTATGTTGCCTAAAAACACTAAGTGTGTATATTGTCGATTCAAAGACAGGGCATAGCTTGGCAGAGTTACATAATCTAAATCTAGGAGGAAAACTGAGCATTGAAGGCCTTCACAAAGTTGGCAGTTTATCAGAAGCTAGAGAGGCCAATTTGAGATGTAAAAAGAACCTTGAGAAACTACGTTTGTCATGGACGGAAAGCAAGTCATGTGTTACTAATCCTGAGCAAGTAATTAAAGAGCTTCAACCTCCCTCAAATCTTAAGTCCCTAGAGATATCTACTTACGGTGGATCATGCTTCCCAGGTTGGATCAGAAATCTTAGTAGTTTAGTTAATCTTAAACTTAAAGGTTGCCCTAACTGCGTACAGATTCCATCCCTTGGTAAACTACCATTTTTAAGAAAACTTAAAATAAGTAATGTGCGTCATGTGCAATACATGGATGATGATGAATGTTACGATGGTGTGGAGATGAGGGCTTTCAAGTCTTTGGAGAAACTCTCTTTAAAATGTTTACCAAACTTGGAGGGATTGTTGAAAGTGGAAGGAAGGGAGACGTTCCTCTGTCTTTCTAATGTTACCCTCATAGATTGCCCTAAACTCCAGTGGCCATGTCTCCCGTCTATTAAAAGCCTGAAAGTAAAAGGATGTAATAATGAGTTGCTGAAGTCAATAGCTAGTATGTCCAGTCTTACCACCCTTTATCTTGAAGATGGTGATAAAGAACTCACATTCTTCCCACCAGAGAGAATGTTGAGAAACCTGACTTGTCTTCAAAAGCTGGTAATAGATTCTTTCCCGGAACTGAAGGAATTATCAAGTGAGCTCTTCAACCTTATCGCTTTAGAGCATCTGTCAATCAAATATTGTGATGAGCTTGAGTCTTTACCGGAGCAAGGTTGGGAAGGTCTTCGCTCCCTTCTATCTCTCAAGTTTTATAAATGTAGAGGATTGAGATCCTTACCTGATGGTATTCAACATCTCACTTCACTTAATAAGCTGGGGTTTTATGATTGTGGAGGATTGAGATCCTTGCCTGATGGAATTCAACACCTTACTTCACTTCAACGTCTAGACATTTGGAACTGTCCAACATTGAAGAAGCGGTGTAGGGAGGGAACAGGAGAGGATTGGGACAAGATAGCGCACATTCCAGACAAAGATATTTGGTGA 3165 0.3889 MAEVLLGPVFEKLLSMVENEFATMTGIKEKAKKLLSTSKLIKAVLEDAEQKQMTDKPVKVWLQELKDAVYVLDDILDECSIESHRLMGPSSFKPRNIVFRYRIGNKLKMISRRFDEIAESKNKFLLRSEHVGERSGGDRDRGVADWRETGITIGQSQIYGRDDDKEKIVEFLLNQARASDSLSIYAIVGLGGVGKTTLAQMVYNDYRVSSTFNTIIWICVSEVFSVKRILCSIIRSINKETKCDDWDLAKIETEVQELLQSKTYLLVLDDVWKMNDELKSGLTQDKWNKLKPVLSCGSKGASILVSTRDRDVATIMETCLAHHLSGLSEDECWLLFKQCAFANRKECEELVAIGKEIVKKCGGLPLAAQALGGLLCSKSEEKEWLEVKESRLWTLRDENSILPALRLSYCYLTPTLKQCFAFCAIFPKDSVIKKGDLIHLWMANGFISSQGSLEVEDDGNMIWNELHQKSFFQDIKINYKGDISFKMHDLIHDLAQSVMGSECMVMDNSNVTDLSRSTHHIQYGSNEDRDARFYFYMTHANEGVFKKIESLRTLYDSRFYIFEDFNTRFLSCFHSLRVLRTSSSKLLSSLANLIHLRYLQLDRLLLVETLPESIYSLRKLEILKLQKLYSLLCLPKHLTCLQNLRHLIVKDCISLSRTSPNMRKLCCLKTLSVYIVDSKTGHSLAELHNLNLGGKLSIEGLHKVGSLSEAREANLRCKKNLEKLRLSWTESKSCVTNPEQVIKELQPPSNLKSLEISTYGGSCFPGWIRNLSSLVNLKLKGCPNCVQIPSLGKLPFLRKLKISNVRHVQYMDDDECYDGVEMRAFKSLEKLSLKCLPNLEGLLKVEGRETFLCLSNVTLIDCPKLQWPCLPSIKSLKVKGCNNELLKSIASMSSLTTLYLEDGDKELTFFPPERMLRNLTCLQKLVIDSFPELKELSSELFNLIALEHLSIKYCDELESLPEQGWEGLRSLLSLKFYKCRGLRSLPDGIQHLTSLNKLGFYDCGGLRSLPDGIQHLTSLQRLDIWNCPTLKKRCREGTGEDWDKIAHIPDKDIW. 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01403 1054 Gene3D - 6 118 - -
Seca7g01403 1054 Pfam Rx N-terminal domain 6 96 IPR041118 -
Seca7g01403 1054 FunFam Probable disease resistance protein At1g63360 409 497 - -
Seca7g01403 1054 Pfam NB-ARC domain 162 389 IPR002182 GO:0043531
Seca7g01403 1054 Gene3D - 326 407 IPR042197 -
Seca7g01403 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 423 IPR027417 -
Seca7g01403 1054 SMART AAA_5 181 327 IPR003593 GO:0016887
Seca7g01403 1054 SUPERFAMILY RNI-like 824 1030 - -
Seca7g01403 1054 Coils Coil 707 727 - -
Seca7g01403 1054 PANTHER DISEASE RESISTANCE PROTEIN RP 40 842 IPR044974 GO:0006952
Seca7g01403 1054 SUPERFAMILY L domain-like 486 841 - -
Seca7g01403 1054 Gene3D Ribonuclease Inhibitor 854 963 IPR032675 -
Seca7g01403 1054 Gene3D Ribonuclease Inhibitor 964 1037 IPR032675 -
Seca7g01403 1054 Gene3D - 149 321 IPR027417 -
Seca7g01403 1054 Gene3D - 408 498 IPR036388 -
Seca7g01403 1054 Gene3D Ribonuclease Inhibitor 536 853 IPR032675 -
Seca7g01403 1054 PRINTS Disease resistance protein signature 361 375 - -
Seca7g01403 1054 PRINTS Disease resistance protein signature 769 785 - -
Seca7g01403 1054 PRINTS Disease resistance protein signature 184 199 - -
Seca7g01403 1054 PRINTS Disease resistance protein signature 258 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01403 Seca-Chr7 23980996 23984160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01403 186 502 WRKY Transcription Factor Family AT5G45050 23.913 3.60e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01403 - - mtr:11405813 1085.48