Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01400 ATGTCGAAGATAGTATGCGTGACTGGGGGCAGTGGATGCATTGGTTCATGGCTGGTTCATCTCCTTCTGGATCGCGGATACACCGTTCACGCCACCGTTCAAAATCTCAACGATGAGACCGAGACGAAGCATCTAGAAGCCCTCGAAGGAGCATCCACCCGCCTCCGCCTCTTCCAGATCGACCTCCTCCGCTACGACACCATCCTCGCCGCCGTCCGCGGCTGCTCCGGCGTTTTCCACCTCGCTTCCCCTTGCATTGTCGACCAAGTCCATGACCCTCAGAATGAGCTTCTGGACCCAGCGATTAAAGGAACCGTGAACGTGCTTTCAGCTGCGAAGGAAGCAGGGGTTCAGCGCGTGGTGGTCACTTCCTCAATCTCCGCAATTTCCCCGAGCCCTAGTTGGCCTTCTGATGTTGTCAAGAGAGAGGATTGCTGGACTGACATTGAATATTGCAAGCAAAAGGGGTTGTGGTATCCAATGTCCAAGACATTGGCTGAGAAAGCTGCTTGGGATTTTGCCAAGGAGAATGATTTGGATGTTGTGGTGGTGAATCCTGGTACTGTGATGGGCCCTGTTATTCCACCAAGGCTCAATGCAAGCATGCTCATGCTTGTTCGACTTCTTCAAGGCTGCACTGAAACATATGAGGACTTTTTTATGGGATCGGTTCACTTTAAAGATGTTGCATTGGCACATATTTTGGTATATGAGAACAAAGCAGCAGCTGGTAGACATTTGTGTGTTGAAGCTATCTCTCACTACGGTGACTTTGTGGCAAAAGTTGCTGAACTATATCCAGAATATAATGTTCCGAGGTAA 822 0.5 MSKIVCVTGGSGCIGSWLVHLLLDRGYTVHATVQNLNDETETKHLEALEGASTRLRLFQIDLLRYDTILAAVRGCSGVFHLASPCIVDQVHDPQNELLDPAIKGTVNVLSAAKEAGVQRVVVTSSISAISPSPSWPSDVVKREDCWTDIEYCKQKGLWYPMSKTLAEKAAWDFAKENDLDVVVVNPGTVMGPVIPPRLNASMLMLVRLLQGCTETYEDFFMGSVHFKDVALAHILVYENKAAAGRHLCVEAISHYGDFVAKVAELYPEYNVPR. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01400 273 FunFam Cinnamoyl-CoA reductase 1 1 273 - -
Seca7g01400 273 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 271 - -
Seca7g01400 273 Pfam NAD dependent epimerase/dehydratase family 5 241 IPR001509 -
Seca7g01400 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 272 IPR036291 -
Seca7g01400 273 CDD FR_SDR_e 5 272 - -
Seca7g01400 273 Gene3D - 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01400 Seca-Chr7 23937617 23940176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01400 3 273 Monolignol Biosynthesis Gene Families AT5G58490 78.967 8.56e-168 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01400 - - gmx:100803241 508.064