Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01397 ATGGGATACACTTCATTGCTTAGAAGTCCAAAGAAAGAAGAACAAGAAGTACCAGATGCTATCACCCCTATGGTACCCAATTCATCAAATGAAGCTTATGCTGATGAAGATTTCAATATTTTGTACGAACTTGAAGGGGTCTTGAACAGTACTACTGAGGAAGAACAAAAGTTACTACTACATAACACTTGTAGTGGTCACTTTCAATGGGATTTCATGGAATGGGAGAAATTTTCCCCTGTTGGAGAGGAAGCAGAGGAACATCAGGTAACAGAGGATAGAAGCAAATGCATGTTAGAGGAGCAGCAGATAAAGAGAGAAAATAATGATGTTGGGTTTTGGGAAGTGGATGATGAAAAGATGATGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCAGATCGTGGGTCTCTATGGGCTGATGACTATTCTCTTTCATTGGCATCCAATAATAATGGTTACTATATGGGAGAAGTGCCAATATTGGAAGAAGAGAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAGGAGAAACGCCAGAACAGGTTGTTCTCAAAGAAGATAAGATATCAAGTTCGGAAATTAAACGCTGATAAAAGACCCAGAATCAAGGGTCGCTTTGTGAAGAGACATTGA 654 0.393 MGYTSLLRSPKKEEQEVPDAITPMVPNSSNEAYADEDFNILYELEGVLNSTTEEEQKLLLHNTCSGHFQWDFMEWEKFSPVGEEAEEHQVTEDRSKCMLEEQQIKRENNDVGFWEVDDEKMMALNLNLNYQEVLDAWSDRGSLWADDYSLSLASNNNGYYMGEVPILEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH. 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01397 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 43 216 - -
Seca7g01397 217 MobiDBLite consensus disorder prediction 1 29 - -
Seca7g01397 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Seca7g01397 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01397 Seca-Chr7 23901387 23906576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01397 117 216 C2C2-CO-like Transcription Factor Family AT1G73870 45.763 5.83e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca7g01397 CCT 2.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01397 - - aprc:113847792 300.441