Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01382 ATGATTCCAATTATCCCAATTCTCAGTTTGTGGAAGCAGCCTCTTTTATGGAGAATTACGGGTTTCATATCAAGTATAATCGGACTGCTTTGTTATGCACTGAGCTCTTCTTCCAAACATCTATTTGGAGAGTGGAATTTGTTGAAGATCTTTCTCTACGGAGTAGGGAGTTTCATTATGTGCAGCTTTGTGTTACTCGCAAAGAAATGGCAACTGTCGAGGAGCCTCATGTTGAAAGCTCATGTGGGATTTTTAGTTTTGATGCTCACTTCTGTTTACTCCTTTTTCTATGACAAGGCAGTTAACGGAAATTCAGATGTATTAGGCTTGATTTCATGTGTTGCGTTTGCTTTGATGTCATTTAGTTTGTCAAGACAAATTGACCTTGGATTTGAGGTAGATCTGCTTAATTTTTTCCTAGGATGTCTTACAGTGCAGCTGATGAAGATTAACTTGATGTTAGCTTTTCTTGGGGCAGTCTTGTGTTATTTCCTTATCATTCTTCGGTCTTCTTTAGATTCTCAACATGACATTGGGAATGTTGGTGCCAATGCCACCCACCATGTAGCCATAGAAATTGATACTGCAAGTAGTTTAGAAGTAGGAGCTGATCATGGCAACGACAGTGAGCTCCAATCTGAATTTAACAATCACTGTCAAGAATTACCCTTATTACGCAAAAGGCATTTTGTCACAACTGTTCCAAATGAGATGAATCTGAGGAATACCTTAGCTTCTTACCGAACAACTGCTAATGCTGCAACACACATACAAGCTGAATTTAGAGAACACACACTGAAGGAGATAAAGGAATTTCAGTTTTCCAATCCAGAGGCTGAAGCACGCAAGATTGTTGCAGCCATGAAGATTCAACATGTCTTTCGTAACTATAAGACAAGGAAGATGACTGAAGCTGCTACTCGCATCCAGCGTAACTTCCGCAAATGGAAGATCTCTAAAGAATCTACCTACACGCGTCAGCAGGCTATTAAAATTCAAGCTGCTTTTCGAGGTTTCCATGTGCGGAAACAATACTCTATAATTCTTTGGTCTATGGGAGTCATTGATAAAACAATCCTGCGCTGCCGTTTTAAGAGAAGAGGCTTTCGTGCGCTCTATGTTAACCTTGTGCAAGAAATGGAAGGTAAGAGGCAGGAAAATAAAGTAGAGGATAAAAAGCAAGCCAAAGAACTTGCTATAAAATTTGTAGTGCATGTTCAGGCCATGTTACGCTCTAAAAAGGCATAG 1248 0.3982 MIPIIPILSLWKQPLLWRITGFISSIIGLLCYALSSSSKHLFGEWNLLKIFLYGVGSFIMCSFVLLAKKWQLSRSLMLKAHVGFLVLMLTSVYSFFYDKAVNGNSDVLGLISCVAFALMSFSLSRQIDLGFEVDLLNFFLGCLTVQLMKINLMLAFLGAVLCYFLIILRSSLDSQHDIGNVGANATHHVAIEIDTASSLEVGADHGNDSELQSEFNNHCQELPLLRKRHFVTTVPNEMNLRNTLASYRTTANAATHIQAEFREHTLKEIKEFQFSNPEAEARKIVAAMKIQHVFRNYKTRKMTEAATRIQRNFRKWKISKESTYTRQQAIKIQAAFRGFHVRKQYSIILWSMGVIDKTILRCRFKRRGFRALYVNLVQEMEGKRQENKVEDKKQAKELAIKFVVHVQAMLRSKKA. 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01382 415 ProSiteProfiles IQ motif profile. 325 353 IPR000048 GO:0005515
Seca7g01382 415 Pfam IQ calmodulin-binding motif 328 345 IPR000048 GO:0005515
Seca7g01382 415 Pfam IQ calmodulin-binding motif 303 318 IPR000048 GO:0005515
Seca7g01382 415 Gene3D - 303 348 - -
Seca7g01382 415 Gene3D - 249 302 - -
Seca7g01382 415 SMART iq_5 324 346 IPR000048 GO:0005515
Seca7g01382 415 SMART iq_5 282 304 IPR000048 GO:0005515
Seca7g01382 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 250 352 IPR027417 -
Seca7g01382 415 ProSiteProfiles IQ motif profile. 286 312 IPR000048 GO:0005515
Seca7g01382 415 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 223 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01382 Seca-Chr7 23554481 23556889 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01382 233 415 CAMTA Transcription Factor Family AT3G16940 51.337 2.21e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01382 - - cam:101500062 426.787