Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01381 ATGAACTCAGAAAAGCTAATTAGTATGGCGGATGCAGATGCTGCAACTGAAGCTCCTTCTTCGCGCTCTTCCACCACTCTGAGGGAAAATGACGTCTTCATCAGCTTCAGAGGTGAGGATACTCGCAGCAATTTCACAAGCCATCTTCATGCGGCCTTGTGCCGGAACAAAATCAAAACCTACATAGACTATGCACTTGAAAAAGGTGACCAGATCTCAGAAGCTCTGATGAAAGCAATAGGAGATTCATATGTGTCGGTGGTTGTGTTCTCAGCAAACTATGCAACTTCCACGTGGTGCCTAGACGAGCTCACCTACATAATGAAGTGCAAAAACCGGGACCAGATTGTCGTACCCGTGTTCTATAACGTAGATCCGTCGCATGTTCGGAAGCAAACTGGTAGCTATGGGAATGCTTTTGAGAAGCATGTTCGTGATCTCAAACACATGATGAAGGTCAATGAGTGGCGAACTGCTTTGACTGAAGCTGCTAGTTTCGCTGGATGGGACTCTCGTAAATATATGCTCGAATCTGAACTCGTTGATGACATTGTCCAAGATGTTTTGCGAAAACTGCAATATAAATATCCAAGCAAATGGAAGGGCCTTTTTGGAATTAACAAGAATTATGCACGTATTGAATCATTGCTGAGAATAGAATCAAGAGAAGTTCGAATGATTGGAATTTGGGGAATGGGAGGCATTGGAAAGACAACCATTGCTGCAGTTATATTTTCCAATTGCTCTTCTCAATTTGAAGGATTTTGTTTCCTGGAAAATGTTGGAGATGAATCAGATAAGCATGGATTGAATCATGTACATAATAAGCTTCTATCTGTGCTACTGGAAGAAGCAAATGTCCATGTTGGCACAGTCAGAGCCGGTTCCAATTTTTGTAAGAGTAGGCTTAGTCATAAAAGAGTTCTCATTGTGCTTGATGATCTAAGAACTCCAGAGCAACTAGATTATCTAGTTGGAGAACATACTTGCTTGGGACCAGGGAGTAGAGTCATTGTTACAACTAGAGATAAGCATGTTCTTAGTAGAGCTGATGAAATATATGAGGTGAAGCCATTAAACTTTCATGAATCTCTTCAGCTGTTCTGTTCAAATGCATTCAACAATGTCCACCCAGATGTTGGTTATGAGCAGCTATCAGAAAGAGTGGTTAAATATGCAGATGGCATTCCATTAGCTTTGAAAGTTCTAGGCAAATTATTTCATTTCAAAAGTAAAGAAACATGGGAAAGTACAATGACAAAGCTCAAGAAAATCCCCCATAAAGAAATTCAGAAGATATTAAGACTGAGTTATGATGGCTTAGATGATAAAGAGAAGGAAATATTTCTGGACATTGCCTGCTTTTTGAAAGGAGAGGAAAGACAGAATGTGAGAAGACTACTAGATGCATGTGGCTTCTATGCAGGTGCTGGTGTAGAAACCCTTTTGGAAAAGTCCCTAATTACTATTTCAAACAACAATGAAATACAAATGCATTCATTAATACAAGAAATGGGTTGGGAAATTGTTCGTCAAGAATCTACTAAAGACCCTGGGAGACGTAGTCGATTGTGTGATCATGAGGAAGTCTGCAATGTATTGAAAAATAACAGGGGGACTGATGCAATTGAAGGTATATGCATAGATGTATCACAAATTAGAGGTATGAACTTGAGGTCTGACATTTTTGCAAAGATGATTAACCTAAGATTTCTCAAGTTCTACTCTCGTTTGGGAGAGAAATGTAATATTTCCTTTCCTGCTGGCCTTGAGTCTTTGTCTAATGAATTACGGTACCTCCATTGGAGTGGATGTCCTGTGGAGTCTCTACCATCAACCTTTTGTCCTGAGAAACTTGTTGAGCTTTCCATGCCAAACAGTCATGTTAAAAAACTATGGGATGGAGTCCAGGATCTTATTAATTTACAGAAAATGGACCTCAGCTGTTCTCAACACTTGATTGAGCTTCCAGATTTCTCCATGGCAATAAATCTTCAAAGCATTAACCTCTCTGGATGTGTAAGTCTAAGCCATGTTCACCCATCTATTTTATCTCTCAAAAAGCTTGTCAATTTAAACATGGTTTGGTGCAAAAGGTTAAAGAGTCTTTTAAGCAATGCCCCTTTAAGATCTCTCAAAATTCTTGAGCTATATGGCTGCTCAAGTCTTAAGGAATTTTCAGTGACATCTGAAGAAATGACATATTTGGATTTAAGAAATACTGCTATTAATGAATTGCCAGCATCAATTAAGCACCTTGGTAATCTTATGAACTTGGAGTTGAGTTGTTGCGGGTATCTTAGGAATCTTCCAAATGAGTTCTCATGCCTGAGATCACTTGGCCGACTGGTACTTTCTGATTGCAGAAAACTTGACACGTCAAATCTGCATTTTCTATTTGATGGCCTCCGTTCATTAGGATACCTGTGTCTAGACAATTGTGGTAACCTAACTGAACTCCCTGACAACATTAGTTTGTTATCATCATTGTATTATTTATCACTAAGTGGAAGCAATGTGGAGAACATGACTGCAAGCATCAAACATCTTTCACAGCTAGAGTCTCTTGACTTGTGCAAATGCATGAGGCTTCAATCTTTACCAGAACTCCCACCATCCATTGAAGTGTTGGATGTCACTAATTGCACCTCCTTGGAGACAGTGCTCACCTCTCCTGTTATTGATGAACTACTACAAGAGCACAAGGTATTCATTTCATTCAAAACTTGTGTGAATTTGAGTGAATATTCCCGCAATGTTATTATGACAGATGCCCATGTCAGAATAAAGGAGGTAGCATTTGTTCATGTTTCAGCAAAAATAGAAAGGAGTGACCCTTGTTACTTTTTCAAATCAGAGGTGATGTCTTCTTATCATCATCCACCAACTGTTATTTACCCAGGAAGTAGAGTTCCAGAGTGGTTTCATTATCGGTCAACTAAGCCATCCATAACAATTGAACTTTTACATTCTCCACAATCCAACATATGTGGTTTCATATTCTGCCTCATTCTTCCTCCATCCCCATCAAATGAAAATTGCAATTGGAAAATTGGATGTGAGTGCTACTTGGAAAGTGGTGAAAAGATTAGAAACACAAGTATGTGCTCTTTTGCAACAGGACTGGTTTCAGATCATGTGTACTTGTGGTATGATGAAAACTTCTGTCTTGAGATGTTTAATACAATTGATGAAAATAGAATTGATGACCAGTACACCTCTTACAATCCAAAGCTTTCATTTGAATTCTTTGTTGAGACTGAGGATAAGTTGAATGTGGTCATTCAAGAGTGTGGGATCTGCCAAATAAATGGTTCAGAATATCTCAATTTTGTTGAACAATTGGGATCTGAGTTGGAGTTGGGAAATAAAATAAAGAGAGGCAGGGATATTTATGAGTTAGAATCAAGTGAAAGAGGGACTCAAGTTGAAGGCTTTTATGAGGAAGAAGATGAACAAGAATATTCATTTCGTCAAACAAAGAAACAGAAGGTGTTCTTTGACTTCTAA 3510 0.3877 MNSEKLISMADADAATEAPSSRSSTTLRENDVFISFRGEDTRSNFTSHLHAALCRNKIKTYIDYALEKGDQISEALMKAIGDSYVSVVVFSANYATSTWCLDELTYIMKCKNRDQIVVPVFYNVDPSHVRKQTGSYGNAFEKHVRDLKHMMKVNEWRTALTEAASFAGWDSRKYMLESELVDDIVQDVLRKLQYKYPSKWKGLFGINKNYARIESLLRIESREVRMIGIWGMGGIGKTTIAAVIFSNCSSQFEGFCFLENVGDESDKHGLNHVHNKLLSVLLEEANVHVGTVRAGSNFCKSRLSHKRVLIVLDDLRTPEQLDYLVGEHTCLGPGSRVIVTTRDKHVLSRADEIYEVKPLNFHESLQLFCSNAFNNVHPDVGYEQLSERVVKYADGIPLALKVLGKLFHFKSKETWESTMTKLKKIPHKEIQKILRLSYDGLDDKEKEIFLDIACFLKGEERQNVRRLLDACGFYAGAGVETLLEKSLITISNNNEIQMHSLIQEMGWEIVRQESTKDPGRRSRLCDHEEVCNVLKNNRGTDAIEGICIDVSQIRGMNLRSDIFAKMINLRFLKFYSRLGEKCNISFPAGLESLSNELRYLHWSGCPVESLPSTFCPEKLVELSMPNSHVKKLWDGVQDLINLQKMDLSCSQHLIELPDFSMAINLQSINLSGCVSLSHVHPSILSLKKLVNLNMVWCKRLKSLLSNAPLRSLKILELYGCSSLKEFSVTSEEMTYLDLRNTAINELPASIKHLGNLMNLELSCCGYLRNLPNEFSCLRSLGRLVLSDCRKLDTSNLHFLFDGLRSLGYLCLDNCGNLTELPDNISLLSSLYYLSLSGSNVENMTASIKHLSQLESLDLCKCMRLQSLPELPPSIEVLDVTNCTSLETVLTSPVIDELLQEHKVFISFKTCVNLSEYSRNVIMTDAHVRIKEVAFVHVSAKIERSDPCYFFKSEVMSSYHHPPTVIYPGSRVPEWFHYRSTKPSITIELLHSPQSNICGFIFCLILPPSPSNENCNWKIGCECYLESGEKIRNTSMCSFATGLVSDHVYLWYDENFCLEMFNTIDENRIDDQYTSYNPKLSFEFFVETEDKLNVVIQECGICQINGSEYLNFVEQLGSELELGNKIKRGRDIYELESSERGTQVEGFYEEEDEQEYSFRQTKKQKVFFDF. 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01381 1169 Gene3D Ribonuclease Inhibitor 732 915 IPR032675 -
Seca7g01381 1169 Gene3D Ribonuclease Inhibitor 511 731 IPR032675 -
Seca7g01381 1169 ProSiteProfiles TIR domain profile. 28 192 IPR000157 GO:0007165
Seca7g01381 1169 Pfam NB-ARC domain 214 439 IPR002182 GO:0043531
Seca7g01381 1169 FunFam Disease resistance protein RPS4 540 731 - -
Seca7g01381 1169 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 169 IPR035897 -
Seca7g01381 1169 SMART till_3 29 166 IPR000157 GO:0007165
Seca7g01381 1169 Gene3D - 27 192 IPR035897 -
Seca7g01381 1169 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 727 IPR044974 GO:0006952
Seca7g01381 1169 Pfam C-JID domain 966 1104 IPR045344 -
Seca7g01381 1169 MobiDBLite consensus disorder prediction 1 24 - -
Seca7g01381 1169 Gene3D - 193 356 IPR027417 -
Seca7g01381 1169 PRINTS Disease resistance protein signature 393 407 - -
Seca7g01381 1169 PRINTS Disease resistance protein signature 302 316 - -
Seca7g01381 1169 PRINTS Disease resistance protein signature 707 723 - -
Seca7g01381 1169 PRINTS Disease resistance protein signature 226 241 - -
Seca7g01381 1169 Pfam TIR domain 31 203 IPR000157 GO:0007165
Seca7g01381 1169 SUPERFAMILY L domain-like 497 889 - -
Seca7g01381 1169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 452 IPR027417 -
Seca7g01381 1169 FunFam Disease resistance protein (TIR-NBS-LRR class) 26 194 - -
Seca7g01381 1169 Gene3D - 359 442 IPR042197 -
Seca7g01381 1169 FunFam Disease resistance protein (TIR-NBS-LRR class) 360 442 - -
Seca7g01381 1169 Pfam Leucine Rich Repeat 618 637 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01381 Seca-Chr7 23540653 23546094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01381 19 856 WRKY Transcription Factor Family AT4G12020 36.545 9.56e-131 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01381 - - mtr:25479456 1764.97