Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01378 ATGTACGAACGGTTTAGAAATCTGTTAACTCACCCGAAGTTCTGGAGAATTGTGGGGTTTGTGTCAAGTGTCATTGGGATGCTCTGTTACGCATGGAGCCTCTCTTTCGAACACGTAGGTGAAAAGTATCACATTTTAAAGATCTCTCTATACGGTGTGGTGAGTTTCACAATCATCTTTGTTATGTTCTTTGCAAGAAAAGGGTTAGGGCGGTTTTCAAAGAGTTTCCTTTTGAAAGCTCTAGTTGGAGTTTTGGCTCTAATGCTAACCTCTTTATACAACTTTTTCAGCGACAAAGACTCAAACCAAAAAACAGATGTTTTCAACTTGATTTCTAATGGGTCATTTGCTTTAATGTTGTTGAGCTTGTCAAAGCAAATTGACCTTGGCTTTGAATTGGAACTACTTAATTTTTACCTTGGATGTCTCACTATACAATTGATGAAGATCAACTTGGGGTTCGTTTTGGTTGGAGCAGCTTATTGTTATTTGCTCAATGTCCTTCACTCCTATTCAGATTTCAATCAAGAGATTAGAACTTCTAGTAATGAAGAACATGTGGCAATTGAAATTGAAACACCTAAGGTAGAAGAAAGAGGAGGACCTATAGTACAACTCTATTCAATTCTTGGAATTGAGATAAAAAATGAGGAGATAGTAATGTACCCTGAAGATCTAGAAGCCAAGCTTATAGAAGCAATGGCTTCAGGTTTTGAGAAGGAGCATTGCTACCCTGTTTTCTGCAGTTGGAGAAGGCTAGTTTTAGAGGAGAGGTTATTAATAAAGAACCTCATGATGAGTATTGAAGAGGTCCAAAAGTTGCCTTTGAAATATCTCAAAGATGAAATTGAATGTTGGATTAAAGCTTCCAAGGATGGTTTTATGACACTGTTTCCAAATGAAAGGCATCTATGTAACCGTGTGTTTGGATTCTCATCTCCTTTTGCTGAAAGCTCTTTCATGGAGATATGTCATGAACCAACCATTCATCTATTGAATTTTGCTAATGCTGTGGCTTGTAGTACAAGCCGGTCATCACCAGAGCGTTTGTTTAAAATAGTGCTTGTGTTTGAGACACTGAATGGAGTTTTACCTGAGTTGGAGTCAATATTCTCAGGTGATTGTTGTGTGGTTCTTTGGAATGAGGCAATGAGAATTTGTAAGAGGTTAAGAGATGCAATTAGAGGAGTTTTTATTGAGCTTGAAAATCTGATTCGTCAGGATCCAGGGAAGGTTGTTGTTTGTGGTGGTGGACTTCATCCAACTAATCACTATTTGATGAATTATCTCTTTGCAGTTTGTCAATGTTGGAAGACACTTGAGCTTGCTTTTGATGATGAAGGTTCACCAGATTCTACACCTTCATTTTCATTGTCTCTTCAGGTGGCTCAGATTTTGGAGTTGTTGGAGAGCAATTTGAAATCGAACTCCAAAATCTACAAGGACTCTTCCTTGTGTTCTATTTTCATGATGAACAATTGGAGGTACATTGTTCACAAGGTGAAAAGGTGTGAATTAGAAAGGGTGTTAGGTGATGAGTGGATACAGAAACACATAGCGAAAATGGGGCAGTACCTTGTAAACTACCAGAGAAGGGCGTGGGACGAGGTACTTGGAATGTTGAATGTAGATAATGATGAGTCACTAGTGGTGGCAGCTTCTTCAGAGTTATGGAGAGAAAAGGTTGAGATGATTAAGATGAAATTTGAGGAGATATGTGAGATGCAGGGTACATGGGTTGTGATTGATGAGCAGATGAGACAAGTCATGAAAAGTTCCTTGAAGAAAATCTTGTTGCTGGCGTTTGAAAAGTTCAGCGCAAGATTCCAAAATGCAGTAGATCCTGATCGAAATGATATGGACATGCATGTGGATTTTGGGGTCCTTGATGTTGTGGTTCTTATAGACAAGCTGTTCCAAGGAAAAGATGAGCACAGAAACCCCAGGAGTTCAGCCAACATGGACCATAGTCCTGCCCAGTACACAAGATTTTCATGA 1998 0.3909 MYERFRNLLTHPKFWRIVGFVSSVIGMLCYAWSLSFEHVGEKYHILKISLYGVVSFTIIFVMFFARKGLGRFSKSFLLKALVGVLALMLTSLYNFFSDKDSNQKTDVFNLISNGSFALMLLSLSKQIDLGFELELLNFYLGCLTIQLMKINLGFVLVGAAYCYLLNVLHSYSDFNQEIRTSSNEEHVAIEIETPKVEERGGPIVQLYSILGIEIKNEEIVMYPEDLEAKLIEAMASGFEKEHCYPVFCSWRRLVLEERLLIKNLMMSIEEVQKLPLKYLKDEIECWIKASKDGFMTLFPNERHLCNRVFGFSSPFAESSFMEICHEPTIHLLNFANAVACSTSRSSPERLFKIVLVFETLNGVLPELESIFSGDCCVVLWNEAMRICKRLRDAIRGVFIELENLIRQDPGKVVVCGGGLHPTNHYLMNYLFAVCQCWKTLELAFDDEGSPDSTPSFSLSLQVAQILELLESNLKSNSKIYKDSSLCSIFMMNNWRYIVHKVKRCELERVLGDEWIQKHIAKMGQYLVNYQRRAWDEVLGMLNVDNDESLVVAASSELWREKVEMIKMKFEEICEMQGTWVVIDEQMRQVMKSSLKKILLLAFEKFSARFQNAVDPDRNDMDMHVDFGVLDVVVLIDKLFQGKDEHRNPRSSANMDHSPAQYTRFS. 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01378 665 Pfam Exo70 exocyst complex subunit 285 612 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01378 665 Gene3D Exocyst complex component Exo70 179 649 - -
Seca7g01378 665 PANTHER EXOCYST COMPLEX PROTEIN EXO70 219 641 IPR004140 GO:0000145|GO:0006887
Seca7g01378 665 MobiDBLite consensus disorder prediction 643 665 - -
Seca7g01378 665 SUPERFAMILY Cullin repeat-like 230 639 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01378 Seca-Chr7 23449536 23459558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01378 225 646 EXO70 exocyst subunit family AT5G58430 48.357 2.14e-121 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01378 K07195 - aprc:113848528 878.241