Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01373 ATGGTGCCCATAATCATCCAAATTCTGAGATGGCTGATGCAGCCTTTAGTGTGGAGGTTTATGGGCTTTGGTTCAGCTGTTGTTGGACTAGTTTGTTACGCTCTCAGCTCCTCCTTCAACCATCTATTTGGACAGTGGAATTTGTTTAAAATATTTCTTTACACTGCTTTCAGTTTCATCATCAGTCTCTTGATTTTGTTTGCAAAGATATGGCAGCAGTCCACAAGTCTCCGGTTCAAAGCTCATTGGGCATTTTTGGTTTTGACCATCACCTCAGTCTATTCCTTTTTCTATGATAAAGTAGTTAATGGGAAACCAGATGCATATAGTCTAATTTCCTGTTCTGCGTTTGCTATCATGACACTGAGCTTATCAAGGCAAACACGGTGCGGATTCGAAGTGGATCTTCTCTATTTCTTTCTCGGATGTCTAAACGTACAACTCATGAAGATAAAATTGCCGTTAGCTATTCTTGGAGCAGGCTTCAGCTACTCCCTCATTATTCTCCGTTCTTACTTTTCTTTGATAGATACCGCACTACAAAATGAGTATGTTGGACTCCAAGATGAACGTTCTGTAGTCATTGAAATCCAGTCACCACAACTGCCAATTAGCAGTACTAGTATCGCTAGTGTGATGCAACAGCTCACAATTTGTGTGAAGGCGCTTCAACTCGAAAATTCCAATCTCATCGACATGTTTTTGGAGCAGGCGAAGGAATACTTTGAAGCTAACTCTGAACCAGTAGTAACCGACCATAACTTCATCATCGATGCGTTGCCGCCGGGAAGGATCAACGATCTTCACGAAACGGTTAATTCGATGGTGGGCGCTGGGTTTGAGAAGGAGTGCTCCGAGGTGTATAGCAGCTGGCGGAGAGGATGGCTGGAGGAGTGCCTAATAAATAAGTTATTAGGGTTGCAAAAGGTCAACCTCGAGAATCAACAGGATAGGGAAGCATTTGCCAGTGAAATAATGACTGGAAGATGGATTACGGCTTCCAAGGTCACTCTCAAGATACTATTTCCTGGTGAGCGACGACTCTGCGATCATGTCTTTTTGGGATTCTCCTCTGCCGCAGATCGTTGTTTCACAGAGGTTTGCAGGGGAGCCACGATTCACCTGCTTAATTTTGCTGATGCTGTTGCCAGTGGGAGCCCTTCAGTGAGGCGATTGTTCCAAATGCTCGGCGTGTTTCAGACACTGCATGATCTAATTCCCCAATTCCAATCATTGTTTCCCGATTCGTTGGTGAACGAAGCAATCGCAGTTTATAACAGATTGGGAGAGGCAAGCAGAGACGTTTTCATGGAATTAGACAATCTGATTTTCCGTATCCCGGAGGCCAAGCTAATTGCCCCAGCCGATGGCGGTTATCATCCAATGATGGACAACTTCATCAGTCACCTCATCTCTGCTTGCAGGTCACGGAAGATCCTGGAGCAAATTTTACAAGATTACCCCAAGGATGCCAATGGAGTTGGAACATCTTCTATATTCACAGTGAAGATGAAGAAGATAATGGAATTGTTAGAGAGAAAATTAATAGTGAAGTCCAAAATCTACAATGTTCCTGCTTTGCGCTATATTTTTATGATGAATAATCGGAAGCGCATAGAAATGATGGATAAAATCTGGGAATTTGGAACAATTACTGGCAATGATTGGTTCGGAAAAAACAGGGCAAAAGTCCAACACAATCTTGAACTCTATCAAAGAAGCTCATGGAATAAGCTGCTTGAGTTTATGAAGCTAGATAGCAATGAGTCAGTGGCACCCAACGTTGCAGTAGAGTCAATGAAAGACAAACTCAATTTGTTCAACCTGCACTTTGAAGAGATATGCAGAGTTCAGTCTACATGGTTTATCTTCAATAAGCAGCTAAGGGAAGAAATAATAACATCCGTAGAAAACATATTGTTGCCTGCATATGGAAATTTCATTGGGAGGTTGCACGATGTTCTTGATAGCAATGATTCAGTGGCACCCAACGTTGCAGTAGAGTCAATGAAAGACAAACTCAATTTGTTCAACCTGCACTTTGAAGAGATATGCAGAGTTCAGTCTACATGGTTTATCTTTAATAAGCAGCTAAGGGAAGAAATAATAACATCCGTAGAAAACATATTGTTGCCTGCATATGGAAATTTCATTGGGAGGTTGCACGATGTTCTTGATAGCAATGATTCAGTGGCACCCAACATTGCAGTAGAGTCAATGAAAGACAAACTCAATTTGTTCAACCTGCACTTTGAAGAGATATGCAGAGTTCAGTCTACATGGTTTATCTTTAATAAGCAGCTAAGGGAAGAAATAATAACATCCGTAGAAAACATATTGTTGCCTGCATATGGAAATTTCATTGGGAGGTTGCACGATGTTCTTGATAGCAATGATTCAGTGGCACCCAACGTTGCAGTAGAGTCAATGAAAGACAAACTCAATTTGTTCAACCTGCACTTTGAAGAGATATGCAGAGTTCAGTCTACATGGTTTATCTTTAATAAGCAGCTAAGGGAAGAAATAATAACATCCGTAGAAAACATATTGTTGCCTGCATATGGAAATTTCATTGGGAGGTTGCACGATGTTCTTGATAGCAATGAGTCAGTGGCACCCAACGTTGCAGTAGAGTCAATGAAAGACAAACTCAATTTGTTCAACCTGCACTTTGAAGAGATATGCAGAGTTCAGTCTACATGGTTTATCTTTAATAAGCAGCTAAGGGAAGAAATAATAACATCCGTAGAAAACATATTGTTGCCTGCATATGGAAATTTCATTGGGAGGTTGCACGATGTTCTTGATAGCAATGAGTCAGTGGCACCCAACGTTGCAGTAGAGTCAATGAAAGACAAACTCAATTTGTTCAACCTGCACTTTGAAGAGATATGCAGAGTTCAGTCTACATGGTTTATCTTTAATAAGCAGCTAAGGGAAGAAATAATAACATCCGTAGAAAACATATTGTTGCCTGCATATGGAAATTTCATTGGGAGGTTGCACGATATTCTTGGTGGGCACGCTTATGAGTGTATTGTGTATGGAATGTTTGATATTCAAGATCGACTCAACCATTTATTTTTTGGAAGTAACACAATGAATTAG 3108 0.4086 MVPIIIQILRWLMQPLVWRFMGFGSAVVGLVCYALSSSFNHLFGQWNLFKIFLYTAFSFIISLLILFAKIWQQSTSLRFKAHWAFLVLTITSVYSFFYDKVVNGKPDAYSLISCSAFAIMTLSLSRQTRCGFEVDLLYFFLGCLNVQLMKIKLPLAILGAGFSYSLIILRSYFSLIDTALQNEYVGLQDERSVVIEIQSPQLPISSTSIASVMQQLTICVKALQLENSNLIDMFLEQAKEYFEANSEPVVTDHNFIIDALPPGRINDLHETVNSMVGAGFEKECSEVYSSWRRGWLEECLINKLLGLQKVNLENQQDREAFASEIMTGRWITASKVTLKILFPGERRLCDHVFLGFSSAADRCFTEVCRGATIHLLNFADAVASGSPSVRRLFQMLGVFQTLHDLIPQFQSLFPDSLVNEAIAVYNRLGEASRDVFMELDNLIFRIPEAKLIAPADGGYHPMMDNFISHLISACRSRKILEQILQDYPKDANGVGTSSIFTVKMKKIMELLERKLIVKSKIYNVPALRYIFMMNNRKRIEMMDKIWEFGTITGNDWFGKNRAKVQHNLELYQRSSWNKLLEFMKLDSNESVAPNVAVESMKDKLNLFNLHFEEICRVQSTWFIFNKQLREEIITSVENILLPAYGNFIGRLHDVLDSNDSVAPNVAVESMKDKLNLFNLHFEEICRVQSTWFIFNKQLREEIITSVENILLPAYGNFIGRLHDVLDSNDSVAPNIAVESMKDKLNLFNLHFEEICRVQSTWFIFNKQLREEIITSVENILLPAYGNFIGRLHDVLDSNDSVAPNVAVESMKDKLNLFNLHFEEICRVQSTWFIFNKQLREEIITSVENILLPAYGNFIGRLHDVLDSNESVAPNVAVESMKDKLNLFNLHFEEICRVQSTWFIFNKQLREEIITSVENILLPAYGNFIGRLHDVLDSNESVAPNVAVESMKDKLNLFNLHFEEICRVQSTWFIFNKQLREEIITSVENILLPAYGNFIGRLHDILGGHAYECIVYGMFDIQDRLNHLFFGSNTMN. 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01373 1035 Pfam Exo70 exocyst complex subunit 805 867 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01373 1035 Pfam Exo70 exocyst complex subunit 329 656 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01373 1035 Pfam Exo70 exocyst complex subunit 736 796 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01373 1035 Pfam Exo70 exocyst complex subunit 875 937 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01373 1035 Pfam Exo70 exocyst complex subunit 665 726 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01373 1035 Pfam Exo70 exocyst complex subunit 945 1023 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01373 1035 SUPERFAMILY Cullin repeat-like 223 657 IPR016159 -
Seca7g01373 1035 SUPERFAMILY Cullin repeat-like 738 797 IPR016159 -
Seca7g01373 1035 SUPERFAMILY Cullin repeat-like 948 1028 IPR016159 -
Seca7g01373 1035 Gene3D Exocyst complex component Exo70 870 938 - -
Seca7g01373 1035 Gene3D Exocyst complex component Exo70 939 1031 - -
Seca7g01373 1035 Gene3D Exocyst complex component Exo70 800 869 - -
Seca7g01373 1035 Gene3D Exocyst complex component Exo70 725 799 - -
Seca7g01373 1035 Gene3D Exocyst complex component Exo70 204 665 - -
Seca7g01373 1035 SUPERFAMILY Cullin repeat-like 668 727 IPR016159 -
Seca7g01373 1035 SUPERFAMILY Cullin repeat-like 808 867 IPR016159 -
Seca7g01373 1035 SUPERFAMILY Cullin repeat-like 878 937 IPR016159 -
Seca7g01373 1035 PANTHER EXOCYST COMPLEX PROTEIN EXO70 941 1030 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01373 Seca-Chr7 23355652 23371949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01373 868 955 EXO70 exocyst subunit family AT5G58430 38.889 6.47e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01373 - - gmx:100788866 691.034