Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01369 ATGGATAACAACAAACCCCCTTATGTAACTTCAACACCAAACTTGAACGTGAAATCAAAACGATCACCATCGTCATCATCATTGTGTCCTAAACCACAAGTTTCAACCACCACCTCAAACTTTGGTTGCTTTAACCATGACATTCGTGAGTTGCCTAATAATTATCTAAGAAATATAGGCCACAAGCACAACCAGTCCGATATTCTCACCCTCCTTGATGATTTTAGAATCGACGATTATCTTGGCACCATGGATGGTCACTCCTTCTCAAGTGGCACCATTGAGAAAGACTCGCTCTCCACCTATCTGGATGTGGATAAACTAAACCCATCCCCTGGTGCCCTTGCAACTGATGTAGACAACTTTTCTATTGCTATTGGTAGTACCAATATCAATGAAAGAATTGACGTTGGGTCCCAACATAGCCTATTTATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTGCTTCTGAAAATGGACCTACTATTAACTCGAAAGAAGCAGTGTCTCCTTTTTCAATTGGTACTTGCGTCGAGGATGATCTTGGTACCATGAGTGGTCACTCACTTTATGATGATACCATTGGGAATGACTTGCTCTCCACCTTCTTCAATATGGATAAACCAAACCCATCCTCCGGTGCTCCTGCATCTACTGCAGATAACGTTGTTGTTGCTAGTGGTACTACCAATATCAATGAAAGGCTTAACGTTGGGTCCCAACATAGCCAATCTATGAATGGTTCAACATCCATCATCAACCCTGACATATTGGTATCTGCTTATGAAATTGGCTCTACTATGAACACAAGAAAAGCAATGTCTGCTTTTTCTATTGGTACTTGCATCAACGATGATCTTGGCATCATGGATAGTCACTCACTCTCCAATGGCACCATTGATGAACACTTGCGCTCCACCTACCTCAATATGGATAAAATAAACCCATCCTCTGGTGCCCTTGCATCTGCTGCATATAACTTTTCTATTTCTATTGGTACTACCAATATGAATGAAAGGCTTGATGTTGGGTCCCAAGATAGCCAGTTTATGAATGGTTCAACATCCATAATCAAATCGGACATGCTGGTCTCTGCTTTTGATAATGGCTCTACCATTAACTCAAAACAAACAGCGTCTGCTTTTTCTATTGGTACTTGGGTCGATGATGATCTTGGGACCATGGATGGTCACTCACTCTATGATGATACCACTAACAAGGACATGCTCTCCACTTACCTCAATATAGATAAACTAAACCCATCCTCTTGTGATCCTGCATCTACTGCAAACAACTTTGCTATTGCTAGTGGTACTACCAATATCAATGAAAGGCCTGACGTTGGGTCCCATCATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTAACATGTTGGTCTCTGCTTCTGAAAATGGATCTACTATTAACTCAAGAAAATCAAAGTCTGCTACTGAGCTTGCGGAGCTTGCCTTGGTTGACCCCAAGCGTGCTAAAAGGATTTTGGCAAATAGACAGTCTGCTATAAGATCAAAGGAAAAGCAGGCGCATTACATTTTGGAGCTTGAAAAGAAGGTGCAAACATTGGAAACTGAAAAGGCATCCCTATCTACACAGTTAACAATCTCGCAAAGGGATACTCAAAGAAAGTATGATGAGAATAATGAGTTAGGGTTGGGGTTGCAAACACTGATACAACAACTTCAGTTGGATGACGAGGAAATTCAACATCTTGAAGTACAAGCTATGCAAGCTATGCTAAATGAAGAACATATGAACTCTGCTGCATGTGGAAGAGGGCAACAATACTATCTCAATGAACAGGCCATGCATCCTCTTTTAGCTACACAACAGTTACAACAACTTCAAAGTCATTCCCAGAACCAACAAGACCAACTTCAAGAACATCAATTACATCAGCAACACCAACAGCAACCACAACCACAACCGCACCAATGCCAAAACCCACAACAAGAGGAGAAGGAGAAACAACATCAATATGAGAAATAG 2028 0.4112 MDNNKPPYVTSTPNLNVKSKRSPSSSSLCPKPQVSTTTSNFGCFNHDIRELPNNYLRNIGHKHNQSDILTLLDDFRIDDYLGTMDGHSFSSGTIEKDSLSTYLDVDKLNPSPGALATDVDNFSIAIGSTNINERIDVGSQHSLFMNGSTSIIKPDVLVSASENGPTINSKEAVSPFSIGTCVEDDLGTMSGHSLYDDTIGNDLLSTFFNMDKPNPSSGAPASTADNVVVASGTTNINERLNVGSQHSQSMNGSTSIINPDILVSAYEIGSTMNTRKAMSAFSIGTCINDDLGIMDSHSLSNGTIDEHLRSTYLNMDKINPSSGALASAAYNFSISIGTTNMNERLDVGSQDSQFMNGSTSIIKSDMLVSAFDNGSTINSKQTASAFSIGTWVDDDLGTMDGHSLYDDTTNKDMLSTYLNIDKLNPSSCDPASTANNFAIASGTTNINERPDVGSHHSQFMNGSTSIIKPNMLVSASENGSTINSRKSKSATELAELALVDPKRAKRILANRQSAIRSKEKQAHYILELEKKVQTLETEKASLSTQLTISQRDTQRKYDENNELGLGLQTLIQQLQLDDEEIQHLEVQAMQAMLNEEHMNSAACGRGQQYYLNEQAMHPLLATQQLQQLQSHSQNQQDQLQEHQLHQQHQQQPQPQPHQCQNPQQEEKEKQHQYEK. 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01369 675 CDD bZIP_plant_RF2 503 554 IPR044759 GO:0003700|GO:0006355
Seca7g01369 675 Coils Coil 625 645 - -
Seca7g01369 675 SUPERFAMILY Leucine zipper domain 502 553 IPR046347 GO:0003700|GO:0006355
Seca7g01369 675 Coils Coil 525 545 - -
Seca7g01369 675 MobiDBLite consensus disorder prediction 1 36 - -
Seca7g01369 675 MobiDBLite consensus disorder prediction 625 675 - -
Seca7g01369 675 Pfam Basic region leucine zipper 500 546 IPR004827 GO:0003700|GO:0006355
Seca7g01369 675 SMART brlzneu 498 562 IPR004827 GO:0003700|GO:0006355
Seca7g01369 675 Gene3D - 501 556 - -
Seca7g01369 675 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 331 665 - -
Seca7g01369 675 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 500 563 IPR004827 GO:0003700|GO:0006355
Seca7g01369 675 Coils Coil 567 587 - -
Seca7g01369 675 MobiDBLite consensus disorder prediction 625 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01369 Seca-Chr7 23192408 23195615 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01369 392 621 bZIP Transcription Factor Family AT1G06070 47.826 4.34e-57 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g01369 bZIP_2 3.8e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01369 - - gmx:100786738 191.045