Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01368 ATGTGCTGCCTTTGCTATCATGTCACTCAGCTTGTCAAGGCAAACACAGTGCGGATTCAAAGTGGATCTTCTCTATCTTGTCAAGGCAAACTCATGAAGATTAAATTGGAGCTAGTTATTGTTGGAGCAGGTTTCAGCTATTCCCTTATTATTCTTCGTTCTTCCTTCTCTTCCATAAATTCAACCGTAGAAAACGAACAACTTGGACTCCAAGATCAACGCATAGTCATGAATTGCGTGGAGGAGCTTCGGAAGAACAATTCGAATCTCACCAACATGCTTTTGCAGCGGGTGAAGAAATACCTTAACGGTAACTCTGAATTGGTAGTGACCGATCACAATTTCATGATCGATGTGCTGCCGCGGGAAACGATGAACAACCTTCATGAAACTGCGAAGTTGATGCTGAACGCTGGGCTTCAGAAAGAGTGCTCCGACGTGTACAGTACTTGGCAGAAGGAATGGTTGGAAGAGTGTCTCATAAATAAATTATTACGGTTGAAAAAGGTGGGATTTCAAGATTACATGATTGGAAGATTGATTAAAACATTCAAAGTCGCTCTCAGGATACTGTTTCCCAGTGAGCGAAGACTCTGCAATCATGTCTTCATGGGATTCTCCTCCACTGCTGATCTCTGTTTCTTAGAGGTTTGTCATGGAGCAGCGATTCAATTGTTGAATTTTGCTGATGAGTTTTTCAGTCTGAGTCCTTCAGCTTGGCATTTGTTTAAAACCCTTGACATGTTTGACACATTGCGTGAAATGATTCCCGAATTCGAATCATTGTTTCCTGATTCGTTGGTCAACGAAGCAAAAAAAGTGGAGAATAGATTGGGAGAAGCAAGTAGGGACATTTTCATGGACTTTGGGTATCTGATTTTTCATACGCCGGATGCGGAGTTTGATGCTTGGGACGATGGCAGGGTTCATCTAATGACCTGCGGTGTCTTGGGCTACCTCGTCAACGCTTTCTGGTCAAGGGAGATGCTGGAGCAGGGACGACATCTTCATTCTCTTTGCAAATGGAGCGAATAA 1035 0.4319 MCCLCYHVTQLVKANTVRIQSGSSLSCQGKLMKIKLELVIVGAGFSYSLIILRSSFSSINSTVENEQLGLQDQRIVMNCVEELRKNNSNLTNMLLQRVKKYLNGNSELVVTDHNFMIDVLPRETMNNLHETAKLMLNAGLQKECSDVYSTWQKEWLEECLINKLLRLKKVGFQDYMIGRLIKTFKVALRILFPSERRLCNHVFMGFSSTADLCFLEVCHGAAIQLLNFADEFFSLSPSAWHLFKTLDMFDTLREMIPEFESLFPDSLVNEAKKVENRLGEASRDIFMDFGYLIFHTPDAEFDAWDDGRVHLMTCGVLGYLVNAFWSREMLEQGRHLHSLCKWSE. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01368 344 SUPERFAMILY Cullin repeat-like 82 330 IPR016159 -
Seca7g01368 344 Pfam Exo70 exocyst complex subunit 181 342 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01368 344 Gene3D Exocyst complex component Exo70 59 340 - -
Seca7g01368 344 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 332 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01368 Seca-Chr7 23185144 23186178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01368 110 332 EXO70 exocyst subunit family AT5G58430 48.945 1.53e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01368 - K07195 lja:Lj2g3v2364680.2 370.163