Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01366 ATGGGATTTATATCAAGTGTCATTGGACTGATCTGTTATGCGTTAAGTTCCTCTTTCAGTCATCTATTTGGAGAATGGAACTTCTTCAAGATCATCTTTTACACCGTGTTTGCTTTAATGTCTTTGTGTTTGTCAAAGCAGATTGAACTTGGGTTTGGAGTGGATCTCCTCAATTTCTTCCTTGGATGCTTAACTGTTCAACTGATGAAAATCAACTTGGTGCTCTCTATAGTTGCAGCCATCCTTTGCCATTCTCTCATGGTTGTTCGTTCCAAATTGGATTCTCAACCAAAAATTGGAACTCGAAGAATGGAAGACCATGTAGCCGTAGAAATTGATGCTGCAGATGACAACAGTAGTGACTTCCAATCTGATTATACCAATGACCGCAGACAAATTCAGTCCTTAAAAAATAGAATGGTGGAAGATGGTTACAATTGGAAAAAATATGAAGAGAAACAAGTGAACAAAAATGTAAATCTGAGAAGCTACTATAAATGCACGAGCCTCAAGTGCCCTGTGAAGAAAAAAGTTGAGAAAACTATAGATGGGCAAATTATTGAGACACTCTACAAAGGCAACCATAACCATTGA 594 0.3771 MGFISSVIGLICYALSSSFSHLFGEWNFFKIIFYTVFALMSLCLSKQIELGFGVDLLNFFLGCLTVQLMKINLVLSIVAAILCHSLMVVRSKLDSQPKIGTRRMEDHVAVEIDAADDNSSDFQSDYTNDRRQIQSLKNRMVEDGYNWKKYEEKQVNKNVNLRSYYKCTSLKCPVKKKVEKTIDGQIIETLYKGNHNH. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01366 197 Pfam WRKY DNA -binding domain 142 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g01366 197 ProSiteProfiles WRKY domain profile. 136 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g01366 197 SMART WRKY_cls 141 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g01366 197 SUPERFAMILY WRKY DNA-binding domain 137 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g01366 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 132 197 IPR044810 GO:0003700
Seca7g01366 197 Gene3D WRKY domain 127 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01366 Seca-Chr7 23182810 23183688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01366 139 197 WRKY Transcription Factor Family AT2G38470 62.712 8.95e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g01366 WRKY 2.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01366 K13424 - mtr:11415730 223.016