Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01345 ATGGAATCCCATAACGGAGTTCATGCCACACTACTTCAAGCTCAAGGTCACATATGGAATCACATTTTCAGCTTCATAAAATCCATGTCCCTTAAATGCGTAGTTGATATAGGCATACCAGATCTCATACACAACTATGGCCAACCCATGCCACTTTCTCAACTCATTGCTTCACTACCAATCCACCCATCCAAAACCCATTTCATCTATCGCTTGATGCGAATCATGACCCATTCTGGCTTCTTCACTCAACAAAATGTCACTGAGAATGAGCTAGAAGTGAAGTATGTTCTTACTGATGCATCTCTACTACTGCTTAAGAATCATCCCTTGAGTGTGACACCTTTCTTACTTGCCATGCTTGATCCAATTTTAACAAACCCATGGCATCATTTTTCTTCTTGGTTCAAGAATGATGACCCTACACCATTTAAAACAACACACAAGATGTTGTTTTGGGATTATGCTGGCAATGATCCCAAACTCAACAACCTATTCAATGATGGCATGGCAAGTGATGCTCAATTGGTGACTAGTGTGGTGATGGAGAAATGCATGTGGGTGTTCAATGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACGGGGACTATGGCAAAGGCCATTGCTAAATCATTCCCAAAGATGGAGTGTATTGTATTTGATTTGCCACATGTTGTTTCAGGCTTAGAAGGAAATGGGAACCTAAAATATGTTGGTGGGGACATGTTTAAGGCAATCCCTCCGGCTGATGCCATTTTGTTGAAGTGGATATTGCATGACTGGAATGATGAGGAATGTATAAACATATTGAAGAAATGTAAAGAAGCAATCACAAGCAAAAACAAAAAAGGGAAGGTGATTATCATAGACATGGTGATGGAGAATGAGAAAGGAGATGAAGAATCATTTGAAACACAACTCTTCTTTGATATGCTGATGATGACATTGGTCACTGGAAAGGAGAGAAACAAAAAAGAATGGGTTAAGTTGATTTCCTACGCCGGTTTTAGAGACTTCAAGATAACTCCAATTTTGGGCTTAAGGTCTCTGATTGAGATGTATCCATAG 1071 0.4024 MESHNGVHATLLQAQGHIWNHIFSFIKSMSLKCVVDIGIPDLIHNYGQPMPLSQLIASLPIHPSKTHFIYRLMRIMTHSGFFTQQNVTENELEVKYVLTDASLLLLKNHPLSVTPFLLAMLDPILTNPWHHFSSWFKNDDPTPFKTTHKMLFWDYAGNDPKLNNLFNDGMASDAQLVTSVVMEKCMWVFNGLESLVDVGGGTGTMAKAIAKSFPKMECIVFDLPHVVSGLEGNGNLKYVGGDMFKAIPPADAILLKWILHDWNDEECINILKKCKEAITSKNKKGKVIIIDMVMENEKGDEESFETQLFFDMLMMTLVTGKERNKKEWVKLISYAGFRDFKITPILGLRSLIEMYP. 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01345 356 Gene3D Vaccinia Virus protein VP39 106 356 IPR029063 -
Seca7g01345 356 FunFam O-methyltransferase ZRP4 107 356 - -
Seca7g01345 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 356 IPR016461 GO:0008168
Seca7g01345 356 Pfam O-methyltransferase domain 129 338 IPR001077 GO:0008171
Seca7g01345 356 Pfam Dimerisation domain 29 76 IPR012967 GO:0046983
Seca7g01345 356 SUPERFAMILY "Winged helix" DNA-binding domain 9 110 IPR036390 -
Seca7g01345 356 Gene3D - 2 105 IPR036388 -
Seca7g01345 356 PANTHER O-METHYLTRANSFERASE 12 339 IPR016461 GO:0008168
Seca7g01345 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 354 IPR029063 -
Seca7g01345 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Seca7g01345 356 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01345 Seca-Chr7 22509254 22511042 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01345 29 342 Monolignol Biosynthesis Gene Families AT5G54160 31.975 1.24e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01345 - K16040 gmx:100781008 595.119