Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01341 ATGCCTTCAACTGCTTTTCAATGGCTAAGCCTTGTAGGCATTATTTGGCTCCAAGCTATAAATGGGACAAACACCAATTTCCCTGCTTACTCCTCCCAGCTAAAGCAACTCCTTTCCATGTCCCAAGTGCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGCAAACTTTTTGGCTGTTTTTCTGGTATGGCTGCTGTTTACCTCCCACTTTGGCTTGTCCTCATGATTGGTTCAACTCTTGGGTTAATTGGTTATGGTGTGCAGTATCTCTTCATAACAAACCAAATTTCCTCTCTGTCCTATTGGCATGTCTTCTTACTAACTGTTCTAGCAGGGAATAGCATTTGTTGGATTAACACTGTTTGCTATGTTGTCACAATAAGGAACTTCTCATCTGATCGCCAAGTTGCTGTGGGATTAACAACTAGTTACCAAGGATTAAGTGCAAAGATTTATACCAGCATTGTTGATTCTGTTTCTGGACACAAGAAAGCTGCAAACTTTCTCTTTTTAAACTCAATCATACCTGTGATAGTTAGCCTTATTGCAGCTCCTTTAGTCAGAGATATTGAAGTCACAAGGCCTAAAAATTTGAGTATTGGATTTGTTGTTATGTTTGTTATTACAATTGCCACTGGAATATATGCTGTTGTGAGCAGCTTGCAATTTGTCTCAAGCAAAATATCTCCACTGGGTAACCTTATTGGTATTCTAGTATCCCTTTTGTTGCCTCTATTAGTTCCTGTTTCCATGAAGATAAGTGCACTAGTGGGGTTGTGGCACACAAAAAGAGAAAGACTAAGAGTGTATCATTTAACAGTAGAGAATCAGACCCCAAATGAAGAGAGGACAGATAATGAAGTGAAAGAGGGTGAAAATAACAGAGAAGTTCAAGAAACAGGTATTAGAGAAGAAATTGGAGTGAAGTTGATGCTGAGAAGAATAGATTTTTGGTTATATTTCTTTGTCTATTTATTTGGTGCAACACTTGGTTTAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCAAGGGGTTGCTCTGGTACTTCATCTTTGGTTTCTTTGTCTTCCTCTTTTGGGTTCTTTGGCCGTCTCATGCCATCTCTCATGGACTACTTTTACAGGGGTCAGTGTAGAATATCAAGACCAGCTTCAATGGTGGCATTGATGGCTCCAATAGCAGGGGCATTTTTTTTACTTCTCAATAAAACTCATTTAGCACTTTATATTAGCACTGCCATAATTGGAGTGTGCACTGGAGCAATTACTTCTATATCTGTTTCCACCACCACAGAGCTATTTGGGACAAAGCATTTCTCTGTGAACCATAATGTGCTAGTGGCAAATATTCCAGTGGGATCATTTCTGTTTGGTTACATGGCTGCAATTATTTACCATATGGAAGGGCATGAACATGGGAAATGCATGGGCACGGAATGTTATAGAAAGACTTTCATCATATGGGGTTCCCTTTGTTTCTTTGGCACTTTCTTGGCTTTGATTCTACATGCTAGAACTCGTAAGTTTTACTCACAAAAAGCAATAGAGTAA 1557 0.3918 MPSTAFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSMSQVQLNNLAFASDAGKLFGCFSGMAAVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFLLTVLAGNSICWINTVCYVVTIRNFSSDRQVAVGLTTSYQGLSAKIYTSIVDSVSGHKKAANFLFLNSIIPVIVSLIAAPLVRDIEVTRPKNLSIGFVVMFVITIATGIYAVVSSLQFVSSKISPLGNLIGILVSLLLPLLVPVSMKISALVGLWHTKRERLRVYHLTVENQTPNEERTDNEVKEGENNREVQETGIREEIGVKLMLRRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLMPSLMDYFYRGQCRISRPASMVALMAPIAGAFFLLLNKTHLALYISTAIIGVCTGAITSISVSTTTELFGTKHFSVNHNVLVANIPVGSFLFGYMAAIIYHMEGHEHGKCMGTECYRKTFIIWGSLCFFGTFLALILHARTRKFYSQKAIE. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01341 518 Gene3D MFS general substrate transporter like domains 230 508 IPR036259 -
Seca7g01341 518 SUPERFAMILY MFS general substrate transporter 5 510 IPR036259 -
Seca7g01341 518 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 513 - -
Seca7g01341 518 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01341 Seca-Chr7 22279219 22281349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01341 1 515 Nodulin-like Gene Family AT2G30300 48.197 4.96e-155 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01341 - - gmx:100808034 813.913