Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01327 ATGCTTTATGCTATGATTGTTGCAGTCTTCAACTATGACTCAACAACACACAATGTGGTTGCTATGGACAGAAGCGGATACAACAGCTGCAATACACCTGCAGGGGCTAAAGTGTTAAGTTCAGGGAAGGACCAAATCAGACTAGCCAGAGGGCAGAACTACTTCATATGCAACTATCCTGGTCACTACCAATCTGGTATGAAGGTTGCCATCAATGCAATATGA 225 0.4356 MLYAMIVAVFNYDSTTHNVVAMDRSGYNSCNTPAGAKVLSSGKDQIRLARGQNYFICNYPGHYQSGMKVAINAI. 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01327 74 Gene3D - 3 73 IPR008972 -
Seca7g01327 74 ProSiteProfiles Phytocyanin domain profile. 1 74 IPR003245 GO:0009055
Seca7g01327 74 Pfam Plastocyanin-like domain 9 67 IPR003245 GO:0009055
Seca7g01327 74 SUPERFAMILY Cupredoxins 9 72 IPR008972 -
Seca7g01327 74 ProSitePatterns Type-1 copper (blue) proteins signature. 51 67 IPR028871 -
Seca7g01327 74 PANTHER BLUE COPPER PROTEIN 8 72 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01327 Seca-Chr7 21703988 21704212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01327 2 74 Phytocyanin Superfamily AT1G17800 40.541 9.55e-13 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01327 - - gmx:100788635 127.872