Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01322 ATGCCACTTTCTCAACTTATTGCTTCACTACCAATCCACCCATCCAAAACCCATTTCATTTATCGCTTGATGCGAATCATGACCCATTCTGGCTTCTTTGCTCAACAAAATGTCACTGAGAATGAGCTAGAAGTGAAGTATGTTCTAACTGATGCATCTCTACTACTGCTTAAGAATCATCCCTTGAGGGTGACACCTTTCTTACTTGCCATGCTTGATCCAATTTTCACAAACCCATGGCATCATTTTTCTTCTTGGTTCAAGAATAATGACCTTACACCATTTGAAACTACACATAAGATGTTGCTTTGGGATTATGCTGGCAATGATCCCAAACTCAACAACCTATTCAATGATTGCATGGCAAGTGACACTCGATTGGTGACTAGTGTGGTGATGGAGAAATGCAAGTGGGTGTTCAATGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACGGGGACTATGACAAAGGCCATTGCTAAATCATTCCCAAAGATGGAGTGCATTTTATTTGATTTGCCACATGTTGTTGCTGGCTTGGAAGGAAGTGAGAACCTAAAATATGTTGATGGGGACATGTTTAAGGCAATCCCTCCACTATGCCAATTTGATTGA 618 0.4142 MPLSQLIASLPIHPSKTHFIYRLMRIMTHSGFFAQQNVTENELEVKYVLTDASLLLLKNHPLRVTPFLLAMLDPIFTNPWHHFSSWFKNNDLTPFETTHKMLLWDYAGNDPKLNNLFNDCMASDTRLVTSVVMEKCKWVFNGLESLVDVGGGTGTMTKAIAKSFPKMECILFDLPHVVAGLEGSENLKYVDGDMFKAIPPLCQFD. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01322 205 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 205 IPR016461 GO:0008168
Seca7g01322 205 PANTHER O-METHYLTRANSFERASE 2 199 IPR016461 GO:0008168
Seca7g01322 205 Gene3D Vaccinia Virus protein VP39 57 205 IPR029063 -
Seca7g01322 205 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 205 IPR029063 -
Seca7g01322 205 Gene3D - 1 56 IPR036388 -
Seca7g01322 205 Pfam O-methyltransferase domain 80 199 IPR001077 GO:0008171
Seca7g01322 205 SUPERFAMILY "Winged helix" DNA-binding domain 1 61 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01322 Seca-Chr7 21532081 21541708 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01322 1 199 Monolignol Biosynthesis Gene Families AT5G54160 29.064 3.42e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01322 - K16040 gmx:100781008 332.028