Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01316 ATGGTCACGTTGGCAACATTTGTGATCCCTAGCTATGGAATGCTACTGACTCCTGATTACTATAACAAAGTGTGCCCACAGGCACAGCCAATCATAAAGTCAATTGTTTTGAAGGCAATTATTCGTGAACCACGCATGGGAGCATCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAACGGTTGTGATGGATCAGTTCTACTGGATGACACCCCTTTCTTCATCGGTGAAAAAACAGCACCTCCAAATAATAACTCACTTAGAGGTTTTGAGGTGATTGATGAAATTAAAGCAGCACTTGACAAAGCTTGCAAAGGCCCTGTGGTATCATGTGCAGATATCTTAGCCATAGCAGCTCGTGATTCTGTAGCCTTATTGGGAGGTCCACAATTTTGGTACAGAGTGTCATTAGGGAGAAGAGATGCAAGATATGCAAGCATCAAGGATACAAAAAATCTTCCTCCCCCATTTTTCAGCTTCTCAGAGCTTCTTTCCAATTTCCAATCTCAAGGATTGGACCTTAAAGACCTTGTGGTTCTCTCTGGTGGACACACCATTGGATTTGCACAGTGTAGTTCCTTCAGAGACAGGATCTTCAATGACACCAACATTGACTACAAGTTTGCTTCCACTCTGCGAAAGACATGCCGAAAAATTGGCCATAATAGCAATTTAGCACCACTTGATGCTACTCCTGCTAAATTTGACACTACTTACTATAAGGCTTTGTTGTATAAAAAGGGTCTTCTCCATTCTGATCAAGAGCTTTTCAAAGGTGATGGTTCTGAAAGTGATAGATTGGTGTATCTATACAGTCAGAATCCTTATGCTTTTGCTAAAGACTTTGGAGTTTCAATGATCAAGATGGGTAATATTAAGCCTCTTACTGGGAAAATGGGTGAGATAAGGTGTAATTGCAGAAAAGTCAACTAG 936 0.4113 MVTLATFVIPSYGMLLTPDYYNKVCPQAQPIIKSIVLKAIIREPRMGASLLRLHFHDCFVNGCDGSVLLDDTPFFIGEKTAPPNNNSLRGFEVIDEIKAALDKACKGPVVSCADILAIAARDSVALLGGPQFWYRVSLGRRDARYASIKDTKNLPPPFFSFSELLSNFQSQGLDLKDLVVLSGGHTIGFAQCSSFRDRIFNDTNIDYKFASTLRKTCRKIGHNSNLAPLDATPAKFDTTYYKALLYKKGLLHSDQELFKGDGSESDRLVYLYSQNPYAFAKDFGVSMIKMGNIKPLTGKMGEIRCNCRKVN. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01316 311 ProSitePatterns Peroxidases active site signature. 47 58 IPR019794 GO:0004601
Seca7g01316 311 ProSiteProfiles Plant heme peroxidase family profile. 15 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Seca7g01316 311 CDD secretory_peroxidase 16 310 IPR033905 GO:0004601|GO:0042744
Seca7g01316 311 Gene3D - 19 308 - -
Seca7g01316 311 FunFam Peroxidase 155 290 - -
Seca7g01316 311 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Haem peroxidase superfamily signature 47 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 FunFam Peroxidase 19 158 - -
Seca7g01316 311 Pfam Peroxidase 36 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 SUPERFAMILY Heme-dependent peroxidases 16 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Plant peroxidase signature 89 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Plant peroxidase signature 227 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Plant peroxidase signature 49 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Plant peroxidase signature 243 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PRINTS Plant peroxidase signature 25 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 PANTHER PEROXIDASE 72-RELATED 16 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01316 311 Gene3D Peroxidase, domain 2 155 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01316 Seca-Chr7 21375405 21378757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01316 16 311 Peroxidase AT5G05340 55.333 5.89e-112 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01316 K00430 - gmx:100810852 458.759