Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01307 ATGTTGTCAGAGAGAATGGTGGGTTGGCTGGATAAGGAAACTCCCAGTTCTTTGAGAAGTTCTTGTAACCAAAGTACCTCCGTAGTTGTGGAACCGATTGTGCGGCAAGCCATATATCCATCTTCTAAAGCTTATTTAGTTAGCAAAATGGCATTTTCTTCTTCTAGATCTTCTTCTTACTCTTCACAAGCCATTTTTGCCTTAGCTTTGTTGATGTTTTTGCTTATAGGGAGTTCCTCAGCTCAACTCTCTGAGAATTTTTATGTTAAGAGGTGTCCCAATGTTTTGAATGCTGTAAAATCAGTTGTTCAATCAGCTGTGGCTAAAGAACCTCGCATGGGAGCATCTCTCCTTCGCCTCTTCTTTCATGATTGCTTTGTCAATGGTTGTGATGGATCAATACTACTTGATGACACTTCTTCATTCCGAGGAGAGAAGACTGCACCTCCCAACAATCAATCTGTAAGAGGATATGAGGTCATTGATGCCATAAAATCAAAGGTGGAGAAAGTGTGCCCCGGTGTGGTGTCATGTGCTGATATTGTTGCAATTGTTGCTCGTGACTCTGTTGTAATTCTTGGAGGGCCATTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAGACAGCCAGCTTCCAAGCTGCATCCGCAAGGAATGTGCTTCCATCTCCCTTTTCTGACCTTAGCACTCTTATCTCAAGTTTTGAAGATCAAGGGCTCTCTACCAAGGACATGGTTGCCTTATCCGGAGCCCATACAATTGGGAAGGCAAAATGTTCTAGTTACAAAACACGTGTATACACTGATACCAACATTGAAAAGTCATTTGCAAAGGCAAGGCAGAGGAACTGTCCAAGGATTAATGGCACATCAAGAGACAATAATGTAGCAAACCTAGACTTCAAAACTCCCAACCATTTTGACAACATGTACTACAAGAACCTCATCAATAAAAAGGGACTCCTTCATTCTGACCAGGTGCTCTTCAATGGAGGGTCTACCGATTCACTAGTTAGAACATACAGCAATAATCCCAAGGCATTTGAAAATGACTTTGTTAATGCAATGATTAAGATGGGAAACATCAAACCTTTAACTGGGTCAAATGGGCAGATTAGGAAGCAGTGCAGGAGACCTAATTAG 1143 0.4164 MLSERMVGWLDKETPSSLRSSCNQSTSVVVEPIVRQAIYPSSKAYLVSKMAFSSSRSSSYSSQAIFALALLMFLLIGSSSAQLSENFYVKRCPNVLNAVKSVVQSAVAKEPRMGASLLRLFFHDCFVNGCDGSILLDDTSSFRGEKTAPPNNQSVRGYEVIDAIKSKVEKVCPGVVSCADIVAIVARDSVVILGGPFWKVKLGRRDSKTASFQAASARNVLPSPFSDLSTLISSFEDQGLSTKDMVALSGAHTIGKAKCSSYKTRVYTDTNIEKSFAKARQRNCPRINGTSRDNNVANLDFKTPNHFDNMYYKNLINKKGLLHSDQVLFNGGSTDSLVRTYSNNPKAFENDFVNAMIKMGNIKPLTGSNGQIRKQCRRPN. 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01307 380 PANTHER PEROXIDASE 72-RELATED 74 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 Gene3D Peroxidase, domain 2 222 359 - -
Seca7g01307 380 FunFam Peroxidase 222 359 - -
Seca7g01307 380 ProSiteProfiles Plant heme peroxidase family profile. 82 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 ProSitePatterns Peroxidases active site signature. 114 125 IPR019794 GO:0004601
Seca7g01307 380 ProSitePatterns Peroxidases proximal heme-ligand signature. 244 254 IPR019793 -
Seca7g01307 380 CDD secretory_peroxidase 82 378 IPR033905 GO:0004601|GO:0042744
Seca7g01307 380 Pfam Peroxidase 99 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 SUPERFAMILY Heme-dependent peroxidases 82 380 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 156 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 194 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 92 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 314 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 354 367 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 116 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 175 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 243 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Plant peroxidase signature 298 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Haem peroxidase superfamily signature 176 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Haem peroxidase superfamily signature 114 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Haem peroxidase superfamily signature 194 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 PRINTS Haem peroxidase superfamily signature 300 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca7g01307 380 FunFam Peroxidase 86 223 - -
Seca7g01307 380 Gene3D - 86 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01307 Seca-Chr7 21147688 21153321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01307 81 380 Peroxidase AT5G05340 66.667 4.38e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01307 K00430 - gmx:100812478 489.189