Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca7g01302 | ATGGAGATAGCTTTGTTTAAGGTGCTCTCTAATGGCATTTCCTCATTTTTACATTTATCATTTTCTGGAAAAATGAACTCAGAACCTGTATCAAAGTATTACCAAAAGGCAGAGAAGGTGCTTAAGGTGTTGAAGCCAATTGTTGATGATGTCACTGTTTCTTCTGATTTAGCTTCTAATGAAGTGCTTACTGAGCTAATCGAGGATCTTGGTCTAGCTGTTGATGAGTTGAGGGAGCTTATTGAGAATTGGCATATATTATCTAGCAAATTTTACTTTGTTATGCAAGTTGAACCATTGATATCAAGAATTCAGGTTTCAGGGCTCAATATTTTACAGCAGCTGAAGGTTTCACAGCAGTGTCTCCCTGATGATTTGGGACCTGAAACATCATCTGCCATTAAAGAAGCTATTGTGGAACAACTGGAAGGTGTAGAACCCAGTCCAGAGGTCCTAGCAAAGATTGCTGAGAACCTGGGCCTCAGGTCTAATCAAGAGGTTCTGATTGAGGCTGTGGCCCTTGAAAGGTTGAAGGAGATTGCTGAACAAACTGAAAAAACTACAGAAGCTGAATATATTGATCAAATGATCTCTGTTATAAATTGTATGCATGAGCACCTTGTTATGCTTAAGCAATCTCAGAGCTCTATCCCAGTGTCAGTTCCTGCTGATTTTTGCTGTCCTCTCTCTTTGGAGTTGATGACAGATCCAGTGATTGTGGCATCAGGGCAAACCTATGAGCGGGCTTTCATCAAGAACTGGATCGATCTGGGGCTTACTGTTTGTCCAAAGACACGTCAGACTCTGGTTCACACCAACCTCATACCTAATTACACTGTAAAGGCATTAATTGCAAGCTGGTGTGAATCAAACAATGTGAAGCTTGTTGATCCCATTAAATCCACAAACTTAAATCAACCATCTCTCCTTCGTGGGTCTACGGAGTCTGGTTCAGCCAAGGAACTGCCTGTTGCAACACCGAATGGTGGAATCCACCAAGAGGGAACATCATCACTGCATCCCCATTCAACTCCAGCAGGTTCCTTGGGTGGCATGGTTAATGGGCAGCATGTGAATCTTGCAAGAATATCACCCACAGGTTCAGATGATGGGTCTTCCAGCTTAGTTGAAGGGAGTATGGATTCAGTTGACCAATCATTAATGTCACCATCCAGAAATGAATCTTCCAATGCCTTGAGCTCAGAACAATCTCAAACCCATATCAGAACTGCTTCTGATTCCACTGCACTCTCTAGTGCAAATTTTCCTCAAGGTACACAAGGTGATAACAACAGTGCTCCTCAACTGTCATCCAATCCCGTCGACAATGAAGATAGTTCTGGGGAATTAAATCAAGGGTCAGATGCTGCTGCCATGCCAACTCCAAATAGAGAACCTGAGTTTTCACCCCAATTGGTGGAGCCAAGGTCTCAAAGCCAAACTGTACTGAGACGGTCATTAGAGAGATTTGTTCCAAGGATAGTGTCATCTCCCTCTGTTGAAACAAGAGCTGATCTTTCTGGTACTGAAACCCATGTTCGGAAATTGGTTGAGGACTTGAAGAGCACTTCTCTTGATACTCAGAGGGAGGCAACAGCTGAACTCCGCCTTCTTGCTAAGCACAACACGGATAACCGAATTGTTATTTCAAATTGTGGAGCCATTGCCTTATTAGTTGATTTGCTTCAATCAACTGATACAACAATCCAGGAAAATTCTGTTACAGCACTTCTTAACTTGTCAATCAATGATAACAACAAAACAGCAATTGCAGATGCTGGTGCAATTGGACCTTTGATTCATGTCCTTAAGACAGGGAGCCCAGAAGCCAAGGAGAATTCAGCTGCCACTCTTTTCAGCTTATCAGTTGTTGAGGGAAACAAGATCAAGATAGGGAGGTCTGGGGCAATTGGACCACTGGTTGATTTATTAGGGAATGGAACCCCTAGGGGCAAGAAAGATGCTGCCACTGCTTTGTTTAATTTGTCAATATTTCATGAAAACAAGGACCGGATTGTGCAAGCTGGTGCAATCAAGAACCTTGTAGAGTTAATGGATCCCGCCGCCGGAATGGTTGATAAGGCAGTGGCTGTTTTAGCAAATCTTGCCACAATACCAGAAGGAAGAAGAGCAATTGGTCAGGAAGGTGGGATTCCTGTTCTGGTTGAGGTTGTGGAGTTGGGTTCTGCAAGAGGAAAAGAGAATGCTGCAGCGGCTCTTCTACATCTATGCTCAGACAATCACAGATTCTTAAACATAGTGCTGCAAGAAGGAGCTGTGCCCCCATTAGTAGCATTGTCACAATCAGGCACCCCAAGGGCCAAAGAAAAGGTATGGCCCTGGGTCTCCTTAATCAATTTAGAAGCCAAAGACATGGTAGTGCTGGGAGGGCTTGATTTTGAATACCAAATCTCTTGA | 2418 | 0.4338 | MEIALFKVLSNGISSFLHLSFSGKMNSEPVSKYYQKAEKVLKVLKPIVDDVTVSSDLASNEVLTELIEDLGLAVDELRELIENWHILSSKFYFVMQVEPLISRIQVSGLNILQQLKVSQQCLPDDLGPETSSAIKEAIVEQLEGVEPSPEVLAKIAENLGLRSNQEVLIEAVALERLKEIAEQTEKTTEAEYIDQMISVINCMHEHLVMLKQSQSSIPVSVPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLVHTNLIPNYTVKALIASWCESNNVKLVDPIKSTNLNQPSLLRGSTESGSAKELPVATPNGGIHQEGTSSLHPHSTPAGSLGGMVNGQHVNLARISPTGSDDGSSSLVEGSMDSVDQSLMSPSRNESSNALSSEQSQTHIRTASDSTALSSANFPQGTQGDNNSAPQLSSNPVDNEDSSGELNQGSDAAAMPTPNREPEFSPQLVEPRSQSQTVLRRSLERFVPRIVSSPSVETRADLSGTETHVRKLVEDLKSTSLDTQREATAELRLLAKHNTDNRIVISNCGAIALLVDLLQSTDTTIQENSVTALLNLSINDNNKTAIADAGAIGPLIHVLKTGSPEAKENSAATLFSLSVVEGNKIKIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIFHENKDRIVQAGAIKNLVELMDPAAGMVDKAVAVLANLATIPEGRRAIGQEGGIPVLVEVVELGSARGKENAAAALLHLCSDNHRFLNIVLQEGAVPPLVALSQSGTPRAKEKVWPWVSLINLEAKDMVVLGGLDFEYQIS. | 806 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca7g01302 | 805 | SUPERFAMILY | RING/U-box | 209 | 298 | - | - | |
| Seca7g01302 | 805 | MobiDBLite | consensus disorder prediction | 304 | 321 | - | - | |
| Seca7g01302 | 805 | Gene3D | - | 476 | 786 | IPR011989 | - | |
| Seca7g01302 | 805 | FunFam | RING-type E3 ubiquitin transferase | 220 | 295 | - | - | |
| Seca7g01302 | 805 | SUPERFAMILY | ARM repeat | 512 | 778 | IPR016024 | - | |
| Seca7g01302 | 805 | SMART | arm_5 | 624 | 664 | IPR000225 | GO:0005515 | |
| Seca7g01302 | 805 | SMART | arm_5 | 705 | 745 | IPR000225 | GO:0005515 | |
| Seca7g01302 | 805 | SMART | arm_5 | 665 | 704 | IPR000225 | GO:0005515 | |
| Seca7g01302 | 805 | SMART | arm_5 | 542 | 582 | IPR000225 | GO:0005515 | |
| Seca7g01302 | 805 | SMART | arm_5 | 583 | 623 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca7g01302 | - | - | gmx:100777715 | 1122.46 |
Showing 1 to 1 of 1 entries