Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01295 ATGTCCTCGTTATTACTGCCCTGCTTGGTGCTTGATACAGGAGGACCAAAATTCTCTAGCTCATTCATTCACTATTCCTTGATGCACAATTGGCACACAAGTTTATTTTTTGTGCCTGTTGTGTTAATATATGATCTGGATAATTCATCAAAAGTCTTGATGCAAAAATATGAATTAGGAAGGTTACTAGGCCAAGGAACATTTGGAAAGGTTTACTATGGAAGGAGCACAATAACTAACCAGAGTGTGGCTGTTAAAGTGATTGACAAGGATAAGGTTATTAGAACTGGGCAAGCTGAGAACATTAAAAGGGAAATATCTGTTATGAGACTGGTTAGGCATCCAAATATCATAGAGCTTTTTGAGGTCTTAGCCACAAAGGGTAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGTGAGCTTTTCAAGAAGGTGGCTAAAGGAAAGCTTAAAGAAGATGTTGCTCATAAATATTTTAAGCAGCTAGTGAGTGCAGTGGATTTTTGCCACAGTAGAGGTGTATACCATAGAGATATAAAGCCAGAGAACATTTTGTTGGATGAGAATGAGAACCTGAAGGTCTCAGATTTTGGGCTAAGTGCCCTGGCTGAATCCAAAAGGCAAGATGGTTTGCTTCATACAGCTTGTGGAACACCTGCCTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGTTATGATGGTGCCAAAGCTGATATTTGGTCTTGTGGAGTGGTTCTGTTTGTGTTATTGGCAGGTTATGTTCCTTTCAATGACTCTAATTTGATGGAGATGTATAAGAAGATAAGCAAAGCAGAGTTCACATGTCCTAAATGGTTCCCAAGAGAAGTCAGGAGGCTATTGTACAAGATGTTGGATCCAAATCCTGACACTAGGATTTCCATAGCTAAGATTATGCAATGTTCTTGGTTTAGGAAAGGGCCAAATGGTAGACAACAAAAACAAGAAGGGGAAAATAGGAATGTCTCTCCTGTTGCAACAAATCATTCTGATCAAAGTGATGAACTAGCAGCAGAAGCAAGGCAAGAGCCAGTTGTGCCTATAAGTATAAATGCCTTTGATATCATCTCACTTTCCACTGGTTTTAATCTATGTGGATTCTTTGAAGACAGTTTTCAGAAAAGGGAAGCAAGATTTACTTCAAGACAACCTGCATCAGTCATTATCTCCAGGCTGGAAGAGATTGCTAAGAGACTGAAGCTGAAAATACAGAAAAGAGCTGCTGGTTTGTTGAAATTAGAGAGCCTTGATGAAGGTAGGAAGGGGATTTTATCCATTGATGCAGAGATCTTTGAGGTTACTCCATTTTTCCATTTGGTGGAAGTGAAAAAATCAAATGGGGATACATTGGAATATCAGAAAATAATGAATGAAGATATAAGGCCTGCTCTTCAAGATATTGTTTGGGTTTGGCAAGGTGATCAACAAGAGCAATTGCAACAGTCAGAGCAACAGCAGCAGCAACAATCACAGCGATAA 1500 0.392 MSSLLLPCLVLDTGGPKFSSSFIHYSLMHNWHTSLFFVPVVLIYDLDNSSKVLMQKYELGRLLGQGTFGKVYYGRSTITNQSVAVKVIDKDKVIRTGQAENIKREISVMRLVRHPNIIELFEVLATKGKIYFVMEYAKGGELFKKVAKGKLKEDVAHKYFKQLVSAVDFCHSRGVYHRDIKPENILLDENENLKVSDFGLSALAESKRQDGLLHTACGTPAYVAPEVIKRKGYDGAKADIWSCGVVLFVLLAGYVPFNDSNLMEMYKKISKAEFTCPKWFPREVRRLLYKMLDPNPDTRISIAKIMQCSWFRKGPNGRQQKQEGENRNVSPVATNHSDQSDELAAEARQEPVVPISINAFDIISLSTGFNLCGFFEDSFQKREARFTSRQPASVIISRLEEIAKRLKLKIQKRAAGLLKLESLDEGRKGILSIDAEIFEVTPFFHLVEVKKSNGDTLEYQKIMNEDIRPALQDIVWVWQGDQQEQLQQSEQQQQQQSQR. 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01295 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Seca7g01295 499 FunFam Non-specific serine/threonine protein kinase 352 476 - -
Seca7g01295 499 SMART serkin_6 57 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01295 499 Pfam Protein kinase domain 57 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01295 499 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 48 471 - -
Seca7g01295 499 Gene3D Kinase associated domain 1, KA1 360 477 - -
Seca7g01295 499 SUPERFAMILY Protein kinase-like (PK-like) 53 346 IPR011009 -
Seca7g01295 499 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Seca7g01295 499 MobiDBLite consensus disorder prediction 314 345 - -
Seca7g01295 499 MobiDBLite consensus disorder prediction 314 340 - -
Seca7g01295 499 ProSiteProfiles NAF domain profile. 352 376 IPR018451 GO:0007165
Seca7g01295 499 ProSiteProfiles Protein kinase domain profile. 57 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01295 499 CDD CIPK_C 358 472 - -
Seca7g01295 499 FunFam Non-specific serine/threonine protein kinase 47 335 - -
Seca7g01295 499 Pfam NAF domain 354 412 IPR004041 GO:0007165
Seca7g01295 499 FunFam Non-specific serine/threonine protein kinase 48 136 - -
Seca7g01295 499 Gene3D Transferase(Phosphotransferase) domain 1 47 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01295 Seca-Chr7 20971890 20973483 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01295 46 484 CBL-interacting serine-threonine protein kinases AT5G58380 68.421 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Seca7g01295 Pkinase 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01295 - K07198 gmx:100779316 754.592