Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01293 ATGCCGGAGATCGAACAGGCGGCGGCGGAGCCCACCGCGCTGTTCGGCAAATATGAATTGGGGAGACTCCTAGGCTGCGGCGCGTTCGCGAAGGTCTACCACGCGCGGAATGTAGAGACAGGACAGAGCGTGGCGGTGAAGGTGATAAGCAAGAAGAAGGTCATGGGAACAGGACTCGTCGGAAACGTGAAGCGCGAGATCTCCATCATGAGCCGTCTCCACCACCCAAACATCGTGAGGCTCCACGAGGTTCTAGCCACCAAGACCAAAATCTACTTCGTCATGGAGTTCGCAAAAGGAGGAGAACTCTTCGCTAGAATCTCCAAAGGTCGCTTCAGCGAAGATCTCGCCCGTCGCTACTTCCAACAACTAATCTCCGCCGTCGGATACTGCCATTACCGCGGCGTCTTCCACCGCGACTTGAAGCCTGAAAACCTCTTGCTCGATGACAAGGGTAATCTGAAGGTCACCGATTTTGGACTAAGCGCGTTGAAGGAGCAGGTTCGGGTGGATGGTTTGTTACACACGCTTTGTGGCACGCCTGCTTACGTGGCACCGGAGATTCTTGTGAGGAAGGGGTATGATGGTGCTAGAGTTGATGTTTGGTCTTGTGGAGTGATTCTATTTGTTCTTGTTGCTGGTTATCTTCCGTTTAATGATCCGAATTTGATGGCGATGTATAAGAAGATTTATAGCGGCGAGTTCCGGTGTCCGCGATGGGTTTCGCCGGATTTGCGGCGGTTTTTGTCGAGGTTAATGGATACGAACCCGGAGACGAGGATAACCGTTGATGAGATTACCAAGGATCCATGGTTTAGGAAGGGGTATAAGGAGGTGAAGTTTCATGAGGAGGATTTGAGGTCGAAGGAGGATGGTAGTGATAATAAGGTTTTGGATTTGAACGCGTTTGATATAATCTCGTTTTTCTCTTCGGGTTTGAACCTTTCGCAGTTGTTTAACAAGGTGGAGGAGGAAGGGGAGCGGTTTATGTTGCGAGAGTCGCCGGAGAGGGTTGTGGAGAAGGCGGAAGCGGCAGCGAAGGCGGAGGGGTTTGCAGTGAGGAGGAAGAATGATTTTGTGGTGGAGGTGGAGGGGCATAATGGGAATTTCGTTATTACGTTGGTGGTTTACCGGTTAACGGAGGAACTGGTTGTGGTGGAAGTGAAGAGGAAGGGAGGGGATGCTGTTGCTTTTGAGAATGTGTGGAGGAACAAGCTGAGGCCTTATCTCTGTGCTGCAACGACGTCGCATCAGAACCAAACTCAGTCTCACGCGGTGTCTTCTAGTTCTTCTGCTGACTGA 1302 0.5146 MPEIEQAAAEPTALFGKYELGRLLGCGAFAKVYHARNVETGQSVAVKVISKKKVMGTGLVGNVKREISIMSRLHHPNIVRLHEVLATKTKIYFVMEFAKGGELFARISKGRFSEDLARRYFQQLISAVGYCHYRGVFHRDLKPENLLLDDKGNLKVTDFGLSALKEQVRVDGLLHTLCGTPAYVAPEILVRKGYDGARVDVWSCGVILFVLVAGYLPFNDPNLMAMYKKIYSGEFRCPRWVSPDLRRFLSRLMDTNPETRITVDEITKDPWFRKGYKEVKFHEEDLRSKEDGSDNKVLDLNAFDIISFFSSGLNLSQLFNKVEEEGERFMLRESPERVVEKAEAAAKAEGFAVRRKNDFVVEVEGHNGNFVITLVVYRLTEELVVVEVKRKGGDAVAFENVWRNKLRPYLCAATTSHQNQTQSHAVSSSSSAD. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01293 433 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Seca7g01293 433 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01293 433 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01293 433 CDD CIPK_C 301 411 - -
Seca7g01293 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Seca7g01293 433 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
Seca7g01293 433 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Seca7g01293 433 Gene3D Kinase associated domain 1, KA1 300 413 - -
Seca7g01293 433 SUPERFAMILY Protein kinase-like (PK-like) 15 281 IPR011009 -
Seca7g01293 433 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 394 - -
Seca7g01293 433 Pfam NAF domain 300 354 IPR004041 GO:0007165
Seca7g01293 433 ProSiteProfiles NAF domain profile. 295 320 IPR018451 GO:0007165
Seca7g01293 433 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01293 433 Gene3D Transferase(Phosphotransferase) domain 1 98 299 - -
Seca7g01293 433 FunFam Non-specific serine/threonine protein kinase 8 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01293 Seca-Chr7 20946299 20948248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01293 1 416 CBL-interacting serine-threonine protein kinases AT2G30360 63.109 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Seca7g01293 Pkinase 4.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01293 - - gmx:100815088 612.068