Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01287 ATGGGTAACAACAGGTTCAGATTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTAAAAGATATGAGCAGATCAAGGAAGAGAAATGGTCCTCATGTTATGAAGAGCAAAGCAACCTCACCAACAACATCTCAAAGGTCACTGCCAAGATATTCACACTATTTCTCCACTGAACCAATTAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAAAGACTTTGACATCCCATTCAATGATTCACCAAGAAGGTCTTCCAAGAGAAGGTCTAGGAGAAAAACCATTTACAAGCCTTCTCCTTCAGTTGTCTCTTCCTCTTTCATAGCTAATTCCAACTATGATTCCACAAATAATTGGACTAAGCCAGATCAAATTCAGTCACCAGATTATGAGGTGTCTTCCATTGAAAGTTCTTCTGAATCTGATCTCCATGAATATGTTTATTCTGAGTCTGATTGTGATAGCTTTTCTGTTCCTGATTTGCTTAATGGAATAGCCCCTGATTGCAGTTGTAGAGTTAGCTCTTCAACTAATGACATCATCATTGACATGAACAATGAATCCTTCCCTGGCAATTCTGAAAAGCTAGATGGTTTTGATACAATTTCACAGCTTGGTCTACCTCCAATATTGACAAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAGCCACAGAATCTAGGAGTTCAACTTCAACTGAATTGGATGATGATGATGATTTTCAGATTGATCAGTCTTTCTCCATCAAAATTAGCAAAGAGGAAAGCAGTAGAACTCAAAGAAGGAGAAAAAGCAGTCACATAGCAAGAAAGTCCTCTCCTAATTCTACAGGCATAAGGCTTAGAATCAATTCTCCAAAACTAGCAAGCAGAAAAATTCAAGCCTGTGCAAGAAGGAGTGTGTCATCTAGTGCAAACAAAGCATCAAGGAATGCAGGATTTCCAGATGGATTTGCTGTTGTTAAGTCCTCATTTGATCCACAAAGTGACTTCAGGGAATCAATGGTGGAGATGATTGTGGAGAACAATATCCGGGCATCAAAAGATTTGGAGGATTTACTTGCCTGTTACCTTTCCCTCAATTCAAGTGAATACCATGATATCATTGTTAAAGCATTTGAGCAAATTTGGTATGACATGGCTCAACTCAGAATGTAA 1164 0.3866 MGNNRFRLSDMIPNAWFYKLKDMSRSRKRNGPHVMKSKATSPTTSQRSLPRYSHYFSTEPIRAGKLYNTPIHTKDFDIPFNDSPRRSSKRRSRRKTIYKPSPSVVSSSFIANSNYDSTNNWTKPDQIQSPDYEVSSIESSSESDLHEYVYSESDCDSFSVPDLLNGIAPDCSCRVSSSTNDIIIDMNNESFPGNSEKLDGFDTISQLGLPPILTKPVKFDDKVIEATESRSSTSTELDDDDDFQIDQSFSIKISKEESSRTQRRRKSSHIARKSSPNSTGIRLRINSPKLASRKIQACARRSVSSSANKASRNAGFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDIIVKAFEQIWYDMAQLRM. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01287 387 Pfam Transcriptional repressor, ovate 326 382 IPR006458 -
Seca7g01287 387 NCBIfam uncharacterized plant-specific domain TIGR01568 320 382 IPR006458 -
Seca7g01287 387 MobiDBLite consensus disorder prediction 27 52 - -
Seca7g01287 387 ProSiteProfiles OVATE domain profile. 322 381 IPR006458 -
Seca7g01287 387 MobiDBLite consensus disorder prediction 254 283 - -
Seca7g01287 387 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 140 382 IPR038933 GO:0045892
Seca7g01287 387 MobiDBLite consensus disorder prediction 77 100 - -
Seca7g01287 387 MobiDBLite consensus disorder prediction 36 52 - -
Seca7g01287 387 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01287 Seca-Chr7 20764453 20765616 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca7g01287 Ovate 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01287 - - gmx:100780926 608.601