Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01286 ATGTATTCCAAGAGAGAGAACAAGGAGGTTGGAAAGGCAGAGCAACGTTATGTGGAAACCGATCCAACTGGTCGCTATGGCAGATTTGGAGATGTTCTTGGAAAAGGTGCAATGAAGACAGTGTACAAAGCAATTGATGAGGTGCTTGGAATAGAGGTAGCATGGAACCAAGTCAGACTCAATGAGGTTCTTAACACACCAGATGATTTGCAACGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCACCAGTCAATCATACGATTTTATACCTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACATCAGGATCATTGAGAGAATACCGGAAGAGATATAAGCGAGTCAGCATACAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAGGGTCTTGTTTATCTACATGGCCATGATCCACCTGTGATCCATAGGGACCTCAAATGTGATAACATATTTGTCAATGGCCATCTAGGACAAGTGAAAATTGGTGATCTGGGACTAGCTGCAATTCTTCATGGTTCTCATTCAGCTCACAGTGTTATAGGCACCCCTGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTATTGGAAATGCTTACATCTGAATATCCATATAGTGAATGTTCTAATCCAGCACAGATCTACAAGAAAGTGACATCGGGAAAGCTACCAATGGCGTTTTTCCGCATTGAAGACATGGAAGCACAGAAGTTTATTGGAAAATGCCTAGTACCTGCAGAAAAGAGACCATCAGCAAAAGATTTGTTGCTTGACCCTTTTCTTGTGTCTGATGATTCATCATCAACAACTAAGTTTATTCAGAAGCCATTTTTGAATGATAGTGAGATGGAAAAATTGCATTTGAGTGATGATCTTCCTAGGACTGAAATGAAAGTAATAGGAAAGCTGAATCCTGAGGATGATACTATCTTTCTCAAAGTGCAAATTTCTGATAAGAATGGTTCTGTTAGGAATGTATTTTTTCCCTTTGACATTCTCACTGACACCCCCGTTGATGTTGCAACGGAGATGGTAAAAGAGTTGGAGATTGTTGATTGGGATCCTTTTGAAATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCACATAGAAGGAAAAATAACTATTCAGATGCTTTCCACACATTCAGTTATCAAGATGATGATGATGATGAACCTCATCATCATTTCCACTCATTCTCTTCTTGTTCATCATTACAAGAACCAATACCAGATTTAATCAGTAAATCTGAGGAAATATCAGGCGGATATTATTGGCTCCATGATGATTTGCGTGATGATAGCAGCTCAAGATGCTCATCACAAGGGACATATTCCAACTTGAATTACTATTCTTTAGATGACCAAGAATACAATGTTGCTTCTATCAAAAAAGATAAGCTTCCCATCATAAAGAGTCACAAAGGCACAAGGTTTTGCCCTTCTGAAGACTTGAACAATTGCAACCATTGTAAAATTTTAGTAGGATCATCACAGACTCCTTCTACTAGTAAAGATAAAATGATGATAGACAATCGTAGGCTTACAAGGAACAGGTCATTAATTGATATAAGGAGCCAATTATTACACCGATCACTGGTTGAAGAGGTGCACAGAAGAAGGCTATTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAATCACCTTATGATGCTTCCAAAAAATAG 1770 0.3893 MYSKRENKEVGKAEQRYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEVLNTPDDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNKAFNFVTEMFTSGSLREYRKRYKRVSIQAIKSWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSHSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQKFIGKCLVPAEKRPSAKDLLLDPFLVSDDSSSTTKFIQKPFLNDSEMEKLHLSDDLPRTEMKVIGKLNPEDDTIFLKVQISDKNGSVRNVFFPFDILTDTPVDVATEMVKELEIVDWDPFEIANMIDREISALLPHRRKNNYSDAFHTFSYQDDDDDEPHHHFHSFSSCSSLQEPIPDLISKSEEISGGYYWLHDDLRDDSSSRCSSQGTYSNLNYYSLDDQEYNVASIKKDKLPIIKSHKGTRFCPSEDLNNCNHCKILVGSSQTPSTSKDKMMIDNRRLTRNRSLIDIRSQLLHRSLVEEVHRRRLFKTVGAVENIGFQSPYDASKK. 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01286 589 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Seca7g01286 589 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Seca7g01286 589 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Seca7g01286 589 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Seca7g01286 589 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01286 589 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01286 589 CDD STKc_WNK 25 285 - -
Seca7g01286 589 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01286 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Seca7g01286 589 SUPERFAMILY Protein kinase-like (PK-like) 28 320 IPR011009 -
Seca7g01286 589 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 447 - -
Seca7g01286 589 Gene3D - 326 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01286 Seca-Chr7 20755121 20761407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01286 17 589 MAP Kinase Kinase Kinase AT5G58350 60.585 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Seca7g01286 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01286 K08867 - gmx:100272203 949.888