Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01275 ATGCAGGATCCACCTTCAAACCCTAATTCCATTCCCAATTCCAATTTCAATCCCAATCTTCACAATGCCAACACCGCTTCACAATTACCGCCGGCGCCGCCGTCCACGGCCGCGACCACCTCCGTCGCCGGCGTCTCCTCGTCATCGTCTTCTTTGTTCGTGCGCTCCGGCGGCAATGGCAGTTCCCACCACCGGAGGGCTCACTCGGAAGTCAGTTTCCGGTTGCCGGACGACATGATGGACCTATCGCCGTCCGATCCGTTCACCGGCGGGTCGTCGACGGCGAGCCTAGAAGAGATCGGATCCGAGGACGACCTGTTCTCGACGTACATTGACGTGGACAAGCTCGGAGGTTCGAACGGCGCCGGAAACGGATCAGATCCGGGTGGGAACGGTGAACTGGAGAAGAGCCCTGCGAGGCCGAGGCACAGGCATAGTAGCTCTGTCGATGGTTCTTCGTCGTTTGGGGAGATTATGGATGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTATGGACAATTGATCCCAAGCGGGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCTCGTTCAAAGGAGAGAAAGGCCCGCTATATACAAGAACTTGAGCGCAAAGTTCAAACCCTTCAGACTGAAGCTACAACTCTTTCTGCCCAACTGACACTATACCAGAGGGACACAACAGGTCTGAGTACTGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAACAACAAGCACAGCTTCGTGATGCTCTTAATGAAGCACTGAAGAAGGAAGTTGAGAGGCTTAAGATTGCTACCGGTGACATAATGAGCCACACTGAATCTTTTAATCTGGGAATGCACCAGGTGCCATTTACAGGATCAAATTTCATGCCAATCCCACCACAATCAGGTCCTGCTGGTCATCAGAACATCCACTTGCCACCATTTGGTCACTCCCCATCTAGCATGCCAAGTCATCAACTACAACAAACAAATTCTCATCCACTTTCAGGAATACTGCAAAATGACCAGCTTGGTCGTTTGCAAGGACTTGACATCAGTAGCAAAGGACCAACTGTCGTGAAGTCTGAAGGCCCCTCACTTTCTGCTAGTGAGAGTAGCACTACATTTTGA 1134 0.5132 MQDPPSNPNSIPNSNFNPNLHNANTASQLPPAPPSTAATTSVAGVSSSSSSLFVRSGGNGSSHHRRAHSEVSFRLPDDMMDLSPSDPFTGGSSTASLEEIGSEDDLFSTYIDVDKLGGSNGAGNGSDPGGNGELEKSPARPRHRHSSSVDGSSSFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGDIMSHTESFNLGMHQVPFTGSNFMPIPPQSGPAGHQNIHLPPFGHSPSSMPSHQLQQTNSHPLSGILQNDQLGRLQGLDISSKGPTVVKSEGPSLSASESSTTF. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01275 377 MobiDBLite consensus disorder prediction 360 377 - -
Seca7g01275 377 Gene3D - 178 230 - -
Seca7g01275 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 240 IPR004827 GO:0003700|GO:0006355
Seca7g01275 377 MobiDBLite consensus disorder prediction 1 96 - -
Seca7g01275 377 MobiDBLite consensus disorder prediction 298 338 - -
Seca7g01275 377 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 30 341 - -
Seca7g01275 377 Coils Coil 195 222 - -
Seca7g01275 377 CDD bZIP_plant_RF2 180 229 IPR044759 GO:0003700|GO:0006355
Seca7g01275 377 FunFam probable transcription factor PosF21 178 231 - -
Seca7g01275 377 MobiDBLite consensus disorder prediction 1 58 - -
Seca7g01275 377 MobiDBLite consensus disorder prediction 350 377 - -
Seca7g01275 377 MobiDBLite consensus disorder prediction 320 338 - -
Seca7g01275 377 MobiDBLite consensus disorder prediction 118 155 - -
Seca7g01275 377 SUPERFAMILY Leucine zipper domain 179 230 IPR046347 GO:0003700|GO:0006355
Seca7g01275 377 Coils Coil 243 267 - -
Seca7g01275 377 SMART brlzneu 175 239 IPR004827 GO:0003700|GO:0006355
Seca7g01275 377 Pfam bZIP transcription factor 179 234 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01275 Seca-Chr7 20261300 20264530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01275 63 377 bZIP Transcription Factor Family AT2G40620 53.203 3.37e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g01275 bZIP_1 6.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01275 - - gmx:100815680 506.523