Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01242 ATGGAGCTGAGCTTGGATTTGAGTTTGGCTTTTGTCCCCAAAACCGTTTCCCTCTTTCTTGGCGACGTTTCTCGGAGCAGAGACAACTCTGAGAAACTTGCCATGCTTGAGGACTTTATCCAGAGATTGGAGGATGAAATGAGGAAGGTTGAGGCTTTCAAACGCGAGCTCCCTCTTTGCATGCTCCTTGTAAACGATGCCATAGCAAGATTGAAAGAGGAAAAACTACGGTGTATCGGAATGCAAGATCCACCTGTAACAGAGGAAGAATTCATGCCGCTGAAGACCAATTATGGAGGAAATGGAAAAGGACCTTCAACCATGGGAAAAGAAAGTTGTGACAAGAAGAATTGGATGAGCTCAGTTCAGCTATGGAACACTGAAACCAAATTGAAGGGTGGAGAAAGTGTTCAACAACTGGATCAGAAGAACGATAGTGGAGGAGCATTTATCTCATTTAATGGCAATTCATTTGTCCCTAAAGAGGTTTCGAAAGTTCCGAGCTTTAGTTTGATGAGTCCAGCTTCTGAACTAAGCCATAGCAATTCCAAGAGTGGTTGTGGAGGTAATAGCTCTGGCTCTTCTTTGCTTCGCGTTGAGATACAGAGTCAACCACAACCACCGCAACATCTGCAGCAGAATCCGAGGAAACAAAGGCGATGCTGGTCACCGGAGCTTCATCGGCGTTTTGTTGACGCGCTTCAACAACTTGGTGGAGCACAAGTGGCCACTCCTAAACAGATTAGAGAACTGATGCAGGTGGAAGGCCTCACAAATGATGAAGTGAAAAGCCACTTGCAAGTGAGTATTTGTATTTCATCAGATCATACCACCAATGGTTAG 843 0.4508 MELSLDLSLAFVPKTVSLFLGDVSRSRDNSEKLAMLEDFIQRLEDEMRKVEAFKRELPLCMLLVNDAIARLKEEKLRCIGMQDPPVTEEEFMPLKTNYGGNGKGPSTMGKESCDKKNWMSSVQLWNTETKLKGGESVQQLDQKNDSGGAFISFNGNSFVPKEVSKVPSFSLMSPASELSHSNSKSGCGGNSSGSSLLRVEIQSQPQPPQHLQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQVSICISSDHTTNG. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01242 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 267 IPR044787 GO:0003700|GO:0006355
Seca7g01242 280 NCBIfam myb-like DNA-binding domain, SHAQKYF class 217 268 IPR006447 GO:0003677
Seca7g01242 280 SUPERFAMILY Homeodomain-like 215 268 IPR009057 -
Seca7g01242 280 Gene3D - 216 269 - -
Seca7g01242 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 214 274 IPR017930 -
Seca7g01242 280 MobiDBLite consensus disorder prediction 92 113 - -
Seca7g01242 280 MobiDBLite consensus disorder prediction 173 194 - -
Seca7g01242 280 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01242 Seca-Chr7 19020114 19021375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01242 1 272 G2-like Transcription Factor Family AT4G37180 39.298 7.16e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca7g01242 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01242 - - pvu:PHAVU_002G021400g 325.094