Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01237 ATGGGAAGAGCTCCTTGTTGTGAGAAAGTGGGGTTGAAGAAGGGGTGGACATCAGAGGAGGATGAGATCTTAGCCAAATTCATTCAAGCCAATGGGGAAGGTTCATGGAGATCATTGCCCAAGAATGCAGGATTATTAAGGTATGGAAAGAGTTACAGAGTAAGATGGATTAGCTATTTAAGAGCTGACCTCAAAAGAGGGAACATTAAAGCTACACGCTTCTTTTGGCAACAGGTTTGTACCAGTGGCATAATATTTGAGAAACGAAACAAGCCTCCTTCCCATTTAGGATCACATTCAGGAAACAGTATTGTATCACTATACTCTGGACTAGAACCATTTACTATAAGTATGCTTACTAATGTGCACAACAGGGGAAAGCTAAGAATCTGA 393 0.4097 MGRAPCCEKVGLKKGWTSEEDEILAKFIQANGEGSWRSLPKNAGLLRYGKSYRVRWISYLRADLKRGNIKATRFFWQQVCTSGIIFEKRNKPPSHLGSHSGNSIVSLYSGLEPFTISMLTNVHNRGKLRI. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01237 130 SUPERFAMILY Homeodomain-like 15 70 IPR009057 -
Seca7g01237 130 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Seca7g01237 130 FunFam MYB-related transcription factor 12 65 - -
Seca7g01237 130 CDD SANT 16 60 IPR001005 -
Seca7g01237 130 Pfam Myb-like DNA-binding domain 16 70 - -
Seca7g01237 130 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 70 - -
Seca7g01237 130 ProSiteProfiles Myb-like domain profile. 13 60 IPR001005 -
Seca7g01237 130 Gene3D - 12 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01237 Seca-Chr7 18854738 18855215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01237 1 71 MYB Transcription Factor Family AT5G49330 79.167 6.88e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g01237 Myb_DNA-bind_6 6.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01237 K09422 - gmx:100814275 133.265