Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01214 TACCTCACAGAAAGAAAGATACTTGATGGAATATCATTTGTTGTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGTAAGGGTAATTCACAGTGGCTGAAGTGGTCCATTGGCCAGTCCAGTCGCTACCTTTATCCAGCAGCATTCAGCATGGCATCTGAAAGGACACATCCATCAACTTTTTCAGTCACTTCCCTTCCAGACCAGTTCAAATCATACATTCTTGCTGATTACAGTCAAATGTTGATAAAGATAGATGGTCAAGATATTCGAGAGATTACCCTTGAGAGTTTACGAAAGTCTATCGGTGTTGTTCCACAAGACACTGTACTTTTCAATGATACGATATTTCATAACATTCACTATGGTCGCCTTTCCGCAACAAAAGAGGAGGTCTATGAAGCTTCTCGGCAAGCAGCAATTCATGATACTATCATGAAATTTCCTGAGAAATATTCAACTGTTGTGGGAGAGCGAGGGCTCAAGGTGATAGAAATCCTCATTTATTTCAATGTTGTGTTTTTGGATGAATTTTTGTTTATGGTAGGAAAGGATATGGTATTGCAAATCTCAAGTCACTAG 594 0.399 YLTERKILDGISFVVPAGKSVAIVGTSGSGKGNSQWLKWSIGQSSRYLYPAAFSMASERTHPSTFSVTSLPDQFKSYILADYSQMLIKIDGQDIREITLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEASRQAAIHDTIMKFPEKYSTVVGERGLKVIEILIYFNVVFLDEFLFMVGKDMVLQISSH. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01214 197 Gene3D - 4 31 IPR027417 -
Seca7g01214 197 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 5 31 IPR039421 -
Seca7g01214 197 Pfam ABC transporter 87 148 IPR003439 GO:0005524
Seca7g01214 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 31 IPR027417 -
Seca7g01214 197 Gene3D - 87 165 IPR027417 -
Seca7g01214 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 167 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01214 Seca-Chr7 17832737 17835818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01214 6 167 Calmodulin-binding Proteins AT2G36910 34.568 3.32e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01214 K05662 - cave:132163259 187.578