Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01206 ATGGATAACAACAAACTCCCTCATGTAACTTCAACACCAAACTTGAACGTGAAATCAAAACGATCACCATCGTTATCATTACTGTGTCCTACACCACAAGTTTCAACTACTACCTCAGACTTCGGTTGCTTTTACCATGAAATTAGTGAGTTGCCTAATAATTCTCTAAGAAATATAGGCCACAGACACACCCAGTCCGAGATTCTCACCCTCCTTGATGATTTTAGCATCGATGATTATCTTGGCACCATGGATGGTCACTCACTCTCAGGTGGCACCATTGAGAAAGACTCTTTCTCCACCTGCCTGAATGTGGATAAACTAAACCCATCCCCTGGTGCCCTAGCATATGATGTAGACAACTTTTCTATTGCTATTGGTAGTACCAATATCAATAAAAGATTTGATGTTGGGTCCCAACATAGCCTATTTATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTGCTTCTGAAAATGGATCTACTATTAACTCGAAACAAGCAATGTCTCCTTTTTCTATTGGTACTTGCATCGAGGATGATCTTAGTACCACGGGTGGTCACTCACTTTATGATGATACCACTGGGAATGACTTGCTCTCCACCTTCTTCAATATGGATAAACTAAACCCATCCTCTGGTGCTCCTGCATCTATTGCAGACACCTTTGTTGTTGCTAGTGGTACTACCAATATCAATGAAAGACTTGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAACCCTGACATATTGGTATCTGCTTCTGAAATTGGCTCTACTATGAACTCAAGAAAAGCAATGCCTGCTTTTTCTATTGGTACTTGCATCAACAATGATCTTGGCACCATGGATAGTCACTCACTCTCCAGTGGCACCGTTGATGAACACTTGCTCTCCACCTACCTTAATATGGATAAAATAAATCCATCCTCTGGTGCCCTTGCATCTGTTGCAGATAACTTTTCTATTACTATTGGTACTACCAATATCAATGAAAGGCTTGACGTTGGGTCCCGAGATAGCCAGTTTATGAATGGTTCAACATCCTTAATCAAATCAGACATGTTGGTCTCTACTTTTGAAAATGGCTCTTCTATTAACTCAAAACAAACAATGTCTACTTTTTCTATTGGTACTTGGATTGATGATGATCTTGGTACCATGGATGGTCACTCACTCTATGATGATACCACTAACAAGCATGTGCTCTCCACTTACCTCAATATAGATAAACTAAACCCATCCTCTGGTGCTCCTGCATCTACTGCGGACAACATTGCTATTGCTAGTGGTACTACCAATATTAATGAAAGGCTTGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTGACATGTTGGTCTCTGCTTTTGAAAATGGATCTACCATTAACTCAAGAAAAGCAAAGTCTGCTACTAAGCTTGTGGAGCTTGCCTTGGTTGACCCCAAGCGTGCTAAAAGGATTTTCGCAAATAGACAGTCTGCTATAAAATCAAAGGAAAAGAAGGCGCATTACATTTCGGAGCTTGAAAAGAAGGTGCAAACATTGGAAACTGAAAAGACATCCTTATCTACACAGTTAACTATCACGCAAGTATGTCTTAACTCATCATTTGCATCTTATGTGTCTATCAACTTGAGATTGTTGTTTACATGTGTTTGA 1719 0.4008 MDNNKLPHVTSTPNLNVKSKRSPSLSLLCPTPQVSTTTSDFGCFYHEISELPNNSLRNIGHRHTQSEILTLLDDFSIDDYLGTMDGHSLSGGTIEKDSFSTCLNVDKLNPSPGALAYDVDNFSIAIGSTNINKRFDVGSQHSLFMNGSTSIIKPDVLVSASENGSTINSKQAMSPFSIGTCIEDDLSTTGGHSLYDDTTGNDLLSTFFNMDKLNPSSGAPASIADTFVVASGTTNINERLDVGSQHSQFMNGSTSIINPDILVSASEIGSTMNSRKAMPAFSIGTCINNDLGTMDSHSLSSGTVDEHLLSTYLNMDKINPSSGALASVADNFSITIGTTNINERLDVGSRDSQFMNGSTSLIKSDMLVSTFENGSSINSKQTMSTFSIGTWIDDDLGTMDGHSLYDDTTNKHVLSTYLNIDKLNPSSGAPASTADNIAIASGTTNINERLDVGSQHSQFMNGSTSIIKPDMLVSAFENGSTINSRKAKSATKLVELALVDPKRAKRIFANRQSAIKSKEKKAHYISELEKKVQTLETEKTSLSTQLTITQVCLNSSFASYVSINLRLLFTCV. 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01206 572 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 57 550 - -
Seca7g01206 572 MobiDBLite consensus disorder prediction 1 22 - -
Seca7g01206 572 Coils Coil 518 545 - -
Seca7g01206 572 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 500 546 IPR004827 GO:0003700|GO:0006355
Seca7g01206 572 Pfam bZIP transcription factor 502 546 IPR004827 GO:0003700|GO:0006355
Seca7g01206 572 CDD bZIP_plant_RF2 503 550 IPR044759 GO:0003700|GO:0006355
Seca7g01206 572 Gene3D - 501 554 - -
Seca7g01206 572 SMART brlzneu 498 566 IPR004827 GO:0003700|GO:0006355
Seca7g01206 572 SUPERFAMILY Leucine zipper domain 502 550 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01206 Seca-Chr7 17569122 17571105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01206 392 567 bZIP Transcription Factor Family AT1G06070 47.917 1.72e-39 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g01206 bZIP_1 1.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01206 - - zju:107405095 154.836