Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01174 ATGGCTTCCCGTTATAATTTAATCTGTAATGTGAATGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAACCAATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCGAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGGTAAGTTTTATTTACACTATGTTTAA 450 0.3711 MASRYNLICNVNGGSEHKIWRIKVRVIRLWRSSYFKDNNNKPMIELVVLDEQGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFERETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVGKFYLHYV. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01174 149 SUPERFAMILY Nucleic acid-binding proteins 17 115 IPR012340 -
Seca7g01174 149 Gene3D - 8 115 IPR012340 -
Seca7g01174 149 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
Seca7g01174 149 CDD RPA1_DBD_A_like 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01174 Seca-Chr7 17067662 17068199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01174 20 132 Core DNA Replication Machinery Family AT2G06510 30.508 5.05e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01174 - - adu:110274503 168.318