Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01144 ATGACCTTAGAGGGGATTTTCATTGAGCCAACTTCAACTACTCCTAATGCTCCTGATCTTTCTCTTCACATAAGCCCTCCAAGTATCTCTTCTTCTTTAGTTGGCACCAATTATGATCAATCTCATGGTTCAGCCCTTTCAAGGACTGTGTCTCAAGCCCACACAGAGCTTTCTCTTGGAAGGAATTTTAGTGGTGGAGGAGAGCAAACACCACACAACAACATCAACAACAACAACCCTTATCATCAAAGCCAAACCCATCATAATTTCCCTCATCTTCTTCACTATCACACCAACAACACTACTACAACTCCATTGAATCACAAAAACTATGGAGTTTCATCAGACGGTTTGAGGCCAATCAAGGGGATTCCAGTGTATCACAACCGTTCATTAGTCCCTTACTTGCCTATGGACCATTTAAGAGACAAGGATCATCATCAAAACCAACACAAGATGTACTTATATCATCACCATCACATGCCTTCTTCTTCTTCTTCCTCTTCTTCTTTACCCTATAACTTGGGTATAGATCCCATGTCCTTAAGGGTAGCCACTGGCACAAGGTTGAATGGGTTTTCATCTGAAGCTTTAATCAAATCTCATCCATTGCACCACCAATCACAATATGGGGTTGGTCCTTCTGAGGCCTCTTCAATGAGATCAAGGTTTTTGCCTAAACTTCCAACAAAGAGAAGCATGAGAGCACCAAGAATGAGGTGGACAAGCACCCTCCATGCTAGATTTGTTCATGCTGTTGAGCTTCTTGGTGGCCATGAAATTCTTGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAACCTGCTGCTTCTTCAGGCCAATCAGATGGATCTGGAGAAGATGAATTGTCACCTATGGGAAGCAATGTTGAGCGTGGCGGTTTAAATTTGCATCAATCCACAGAGCAACACAGAGGTAGATCAAATAATGATGGAGCAATGCAACAAGAAATAGTGGAATACTCTCCAACCACCTCTACTCTATGGACTAACTCTTCAAGTTGTGGAGAGCCATGGCGACGAAATACTTCTAACGACATAGATGGTCTCAGACCACCTATCCTCCATTCACAGATAATATCTAGAGGACAACAAATTCAGAGTAGTAATAACAAATAG 1188 0.4217 MTLEGIFIEPTSTTPNAPDLSLHISPPSISSSLVGTNYDQSHGSALSRTVSQAHTELSLGRNFSGGGEQTPHNNINNNNPYHQSQTHHNFPHLLHYHTNNTTTTPLNHKNYGVSSDGLRPIKGIPVYHNRSLVPYLPMDHLRDKDHHQNQHKMYLYHHHHMPSSSSSSSSLPYNLGIDPMSLRVATGTRLNGFSSEALIKSHPLHHQSQYGVGPSEASSMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHEILELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDELSPMGSNVERGGLNLHQSTEQHRGRSNNDGAMQQEIVEYSPTTSTLWTNSSSCGEPWRRNTSNDIDGLRPPILHSQIISRGQQIQSSNNK. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01144 395 MobiDBLite consensus disorder prediction 349 374 - -
Seca7g01144 395 MobiDBLite consensus disorder prediction 286 317 - -
Seca7g01144 395 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g01144 395 Gene3D - 236 287 - -
Seca7g01144 395 MobiDBLite consensus disorder prediction 349 364 - -
Seca7g01144 395 MobiDBLite consensus disorder prediction 286 305 - -
Seca7g01144 395 NCBIfam myb-like DNA-binding domain, SHAQKYF class 237 284 IPR006447 GO:0003677
Seca7g01144 395 SUPERFAMILY Homeodomain-like 234 284 IPR009057 -
Seca7g01144 395 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 365 IPR044847 GO:0000976|GO:0006355|GO:0010158
Seca7g01144 395 MobiDBLite consensus disorder prediction 205 235 - -
Seca7g01144 395 MobiDBLite consensus disorder prediction 59 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01144 Seca-Chr7 16504909 16513885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01144 1 373 G2-like Transcription Factor Family AT5G16560 40.048 8.56e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca7g01144 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01144 - - gmx:100812229 402.905