Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01139 ATGAAGCTGAAGAACCCGACCCATCTCCTAAAGCCCCAAACTTTGGCCATTTTCCTATTTGGGTTCTTCTACGTCGTCGTTTTCGTAACCTCTCAAGACGATGCTTCAGTAATGTTAGCTCTGAAAAACAACCTGAACCCACCCGAGTCATTCGGGTGGTCCGACCCGGACCCCTGTAAGTGGAACCATGTGTCCTGCTCCGATGATAAACGGGTTACCCGGATCCAAATCGGGCGCCAAAACCTCCATGGCACTCTCCCTGATAGTCTTCAGAAGCTTTCGGAGTTGCAGCACTTGGAGCTCCAATTCAACAACTTCTCGGGTCCCCTTCCAACCCTTAACGGGTTAAGCTCCCTGCAAGTTTTGATGGCCAGTAACAACCGCTTCACCGCCATCCCCGCCGACTTCTTCGCCGGAATGTCGCAGCTCATCTCCGTGGAGATCGACAACAACCCCTTTGAGCCTTGGGAGATTCCTCAGTCTCTCCGAAACGCTTCAGCGCTTCAGAACTTCTCTGCAAACTCTGCTAATATCAAAGGTAAGGTACCTGATTTCTTTGGTGCTGACGTGTTCCCTGGCTTGACCCTTTTGCATTTAGCCTTAAACAACCTTGAGGGTGGGTTGCCTTCAAGCTTTTCTGGGTCACAGATTGAGTCTTTGTGGTTGAATGGCCAGAAGAGTGATGGTAAGCTTGGTGGGACTGTTGAGGTTTTGCAGAACATGACTTCTTTGACACAGGTTTGGTTGCACTCCAACGCTTTTACTGGTCCTTTGCCAGACTTTTCAGGGTTGAAAAGTTTGGAGGATTTGAGCTTGAGGGATAACTCCTTCACTGGTCCTGTTCCAAGTTCATTGGTGAGCCTTAAGTCGCTCAAAGTTGTGAACTTGACTAATAACATGTTTCAGGGTCCAATGCCAGTGTTTGGGGATGGGGTTCAGGTGGATAATACTAAGGATTCCAATAGCTTTTGCTTGCCCAGTCCTGGTGATTGTGATCCTAGGGTTCAGGTTCTTCTTTCAGTTGTTGAGGTTTTGGGTTATCCTAAGAGGTTTGCTGAGAGTTGGAAAGGGAATGATCCTTGTGTTAATTGGATTGGGATTACTTGTAGTGATGGGAACATTACTGTTGTCAATTTTCAGAAGATGGGTCTTAGTGGTATGATATCTCCTGAATTTGCCAAGCTTAAATCACTGCAAAGACTCCTGCTTGCTGATAATAATCTCACTGGTCCAATTCCTGAGGAGCTTACTGCTTTGCCTGTGCTTACTCAATTGAATGTTGCAAACAATCAGCTGTATGGAAAAATACCAAGTTTTAGGAGCAATGTAATTGTCAGCACAAGTGGTAACAATGATATAGGGAAGGATAAAAGCAGCCAGTCCCCTCAGGGTCCACTGGCTCCAGCAGTTCCCAATGGAAAGGGAGAAGATGGTGGTAGTTCTGGAAATGGTGGTAAAAAGTCATCTTCCCATGTAGGAGTGATTGTGATTGCTGTGATTGGAGGTGTATTTGTGGTTTCATTGATTGGTTTCGTGGTTTTCTGCTTGCTAAGGATGAGGCAAAAGAAGTTAAGCAGGGTCCAGAGCCCAAATGCTCTAGTTATTCACCCTCGGCATTCTGGATCAGATAATGATAGTGTGAAGATAACAGTTGCAGGTTCAAGTGTCAGTGTTGGAGGTGCTAGTGAAACCCAGACTGTACCGAGCAGTGAGGCAGGAGATATTCAAATGGTTGAAGCAGGAAACATGGTCATTTCTATTCAAGTCCTGAAGAATGTCACTAACAATTTCAGTGAGAAAAACATATTGGGACAAGGAGGCTTTGGAACAGTTTATAAAGGCGAACTCCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAATCTGGGGCAATAACTGGGAAGGGTGCAGGAGAATTTAAGTCTGAAATTGCTGTTTTGACAAAGGTTCGTCACAGGCATCTTGTTGCTCTTCTTGGTTACTGCTTGGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGGACCCTAAGTAGGCATCTTTTCAACTGGCCAGAGGAAGGACTGGAACCACTGGAGTGGAATAGAAGATTGACAATTGCCTTAGATGTCGCAAGGGGTGTTGAGTACCTCCATAGCCTGGCCCATCAAAGCTTCATACACAGAGACTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGTCTAGTGCGACTTGCTCCAGAAGGAAAAGCTTCTATTGAAACAAGAATTGCAGGAACTTTTGGATATTTAGCACCAGAGTATGCAGTTACCGGCCGTGTGACAACTAAAGTTGATGTATTCAGCTTTGGAGTAATACTGATGGAGCTGATAACTGGAAGAAAAGCACTTGATGAGACCCAACCTGAGGATAGCATGCATCTTGTAACATGGTTCCGAAGAATGTACTTAAATAAGGACTCATTCCGCAAGGCCATTGACCCCACAATTGAGATCAATGAGGAAACACTTGCTAGCATTCACACTGTAGCAGAGTTAGCTGGGCACTGCTGTGCAAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTTAATGTGCTTTCTTCTCTTGTGGAACTATGGAAACCAACTGATCAGAACTCTGAAGATATATATGGTATTGACCTTGACATGTCTTTACCACAAGCACTTAAGAAGTGGCAGGCTTATGAAGGTGCAAGTCATATGGAATCATCATCTTCTTCACTTCCTCCAAGCTTGGATAACACACAGACAAGTATACCTACGCGCCCGTATGGATTCGCTGATTCTTTCACATCTGCAGATGGTAGGTGA 2853 0.4522 MKLKNPTHLLKPQTLAIFLFGFFYVVVFVTSQDDASVMLALKNNLNPPESFGWSDPDPCKWNHVSCSDDKRVTRIQIGRQNLHGTLPDSLQKLSELQHLELQFNNFSGPLPTLNGLSSLQVLMASNNRFTAIPADFFAGMSQLISVEIDNNPFEPWEIPQSLRNASALQNFSANSANIKGKVPDFFGADVFPGLTLLHLALNNLEGGLPSSFSGSQIESLWLNGQKSDGKLGGTVEVLQNMTSLTQVWLHSNAFTGPLPDFSGLKSLEDLSLRDNSFTGPVPSSLVSLKSLKVVNLTNNMFQGPMPVFGDGVQVDNTKDSNSFCLPSPGDCDPRVQVLLSVVEVLGYPKRFAESWKGNDPCVNWIGITCSDGNITVVNFQKMGLSGMISPEFAKLKSLQRLLLADNNLTGPIPEELTALPVLTQLNVANNQLYGKIPSFRSNVIVSTSGNNDIGKDKSSQSPQGPLAPAVPNGKGEDGGSSGNGGKKSSSHVGVIVIAVIGGVFVVSLIGFVVFCLLRMRQKKLSRVQSPNALVIHPRHSGSDNDSVKITVAGSSVSVGGASETQTVPSSEAGDIQMVEAGNMVISIQVLKNVTNNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMESGAITGKGAGEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLEPLEWNRRLTIALDVARGVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEDSMHLVTWFRRMYLNKDSFRKAIDPTIEINEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPTDQNSEDIYGIDLDMSLPQALKKWQAYEGASHMESSSSSLPPSLDNTQTSIPTRPYGFADSFTSADGR. 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01139 950 Gene3D Transferase(Phosphotransferase) domain 1 675 895 - -
Seca7g01139 950 SUPERFAMILY Protein kinase-like (PK-like) 574 881 IPR011009 -
Seca7g01139 950 Gene3D Ribonuclease Inhibitor 333 457 IPR032675 -
Seca7g01139 950 MobiDBLite consensus disorder prediction 915 950 - -
Seca7g01139 950 FunFam receptor protein kinase TMK1 675 892 - -
Seca7g01139 950 SMART serkin_6 597 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01139 950 PANTHER OSJNBA0070M12.3 PROTEIN 17 950 - -
Seca7g01139 950 SUPERFAMILY L domain-like 58 441 - -
Seca7g01139 950 FunFam Leucine-rich repeat receptor-like kinase 333 456 - -
Seca7g01139 950 MobiDBLite consensus disorder prediction 450 466 - -
Seca7g01139 950 CDD TM_EGFR-like 495 523 - -
Seca7g01139 950 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Seca7g01139 950 Pfam Protein kinase domain 598 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01139 950 FunFam receptor protein kinase TMK1 559 674 - -
Seca7g01139 950 SMART LRR_typ_2 116 139 IPR003591 -
Seca7g01139 950 SMART LRR_typ_2 395 419 IPR003591 -
Seca7g01139 950 SMART LRR_typ_2 264 288 IPR003591 -
Seca7g01139 950 SMART LRR_typ_2 191 214 IPR003591 -
Seca7g01139 950 CDD STKc_IRAK 603 876 - -
Seca7g01139 950 Gene3D Phosphorylase Kinase; domain 1 557 674 - -
Seca7g01139 950 Gene3D Ribonuclease Inhibitor 31 331 IPR032675 -
Seca7g01139 950 FunFam Receptor-like kinase TMK4 32 329 - -
Seca7g01139 950 ProSiteProfiles Protein kinase domain profile. 597 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01139 950 MobiDBLite consensus disorder prediction 915 939 - -
Seca7g01139 950 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Seca7g01139 950 Pfam Leucine rich repeat N-terminal domain 335 370 IPR013210 -
Seca7g01139 950 MobiDBLite consensus disorder prediction 450 488 - -
Seca7g01139 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01139 Seca-Chr7 16350248 16353861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01139 75 879 Receptor kinase-like Gene Family AT5G07280 31.928 1.11e-83 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Seca7g01139 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01139 K00924 - gmx:100789646 1532.69