Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01135 ATGGCAAGTTGGATTGAGGCATTTCTGGAAAATACTTTCTTTAACAAATGTCCTTCTCATCCAATTCGTAGGAATGAGTTAAATAAATATTGTATTAACTGCGATATGTCAGCTTGCCAATATTGTGTATCATCAGGTTCTCATCGCCATCACAAGATGCTTAAAATTTATAGACATGTTTACAAAGATGTTGTCTCCCTTTCTGCTATGGAAAAGTATGTTGATTGCTCGCATATCCAGCCCTACAAGTGCAACAAGCGACGGGTTATTTCTCTGAATCCTCACCCCCACTGTGCTTCAACATTAAATAATGAGGCATCATGCAACATCTGCAATAGAAAGTTGACTGAACCTAATTTATACCGCTACTGCTCCATTTCTTGCAAGATTCTGAACTTTCAGGTCAAAGCTATTTCAGGAGAGTGTGATGACTCAATTCCTCCTTCAATTTCCATCCATAGTCATCCTCCTCTTCCTCCTCCTGAGGAAAATCTGGAGGAAACTTTTGAACCCCCAAAGCGGAAAAGGAGTAGAAAGGGAACACCCCACAGAGCTCCCTTCTTCTAA 567 0.4039 MASWIEAFLENTFFNKCPSHPIRRNELNKYCINCDMSACQYCVSSGSHRHHKMLKIYRHVYKDVVSLSAMEKYVDCSHIQPYKCNKRRVISLNPHPHCASTLNNEASCNICNRKLTEPNLYRYCSISCKILNFQVKAISGECDDSIPPSISIHSHPPLPPPEENLEETFEPPKRKRSRKGTPHRAPFF. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01135 188 SUPERFAMILY B-box zinc-binding domain 14 59 - -
Seca7g01135 188 Gene3D Classic Zinc Finger 11 56 - -
Seca7g01135 188 ProSiteProfiles Zinc finger B-box type profile. 17 56 IPR000315 GO:0008270
Seca7g01135 188 CDD Bbox2 16 56 - -
Seca7g01135 188 Pfam PLATZ transcription factor 58 130 IPR006734 -
Seca7g01135 188 Pfam B-box zinc finger 15 56 IPR000315 GO:0008270
Seca7g01135 188 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 187 - -
Seca7g01135 188 MobiDBLite consensus disorder prediction 151 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01135 Seca-Chr7 16155264 16156786 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca7g01135 PLATZ 3.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01135 - - tcc:18601328 232.646