Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01134 ATGCCAAGTTGGATTGAGGCATTTCTGGAAAATACTTTCTTTAACAAATGTCCTTCTCATCCAATTCGTAGGAATGAGTTAAATAAATATTGTATTAACTGCGATATGTCAGCTTGCCAATATTGTGTATCATCAGGTTCTCATCGCCATCACAAGATGCTTAAAATTTATAGACATGTTTACAAAGATGTTGTCTCCCTTTCTGCTATGGAAAAGTATGTTGATTGCTCGCATATCCAGCCCTACAAGTGCAACAAGCGACGGGTTATTTCTCTGAATCCTCTCCCCCACTGTGGTTCAACATTAAATAATGAGGCATCATGCAACATCTGCAATAGAAAGTTGACTAGACCTAATTTATACCGCTACTGCTCTATTTCTTGCAAGGTGAGATGTCTGAACTTTCAGGTCAAAGCTGTTTCAGGAGAGCGTGATGATTCAGTTCCTCCTTCCATTTCCATCCAGAGTCATCCTCCTCCTCCTCCTGAGGAAAACCAGGAGGAAACTTCTGAACCACCAAAGCGGAAAAAGAGTAGAAAGGGAACACCCCACAGAGCTCCCTTCTTCTAA 570 0.4123 MPSWIEAFLENTFFNKCPSHPIRRNELNKYCINCDMSACQYCVSSGSHRHHKMLKIYRHVYKDVVSLSAMEKYVDCSHIQPYKCNKRRVISLNPLPHCGSTLNNEASCNICNRKLTRPNLYRYCSISCKVRCLNFQVKAVSGERDDSVPPSISIQSHPPPPPEENQEETSEPPKRKKSRKGTPHRAPFF. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01134 189 SUPERFAMILY B-box zinc-binding domain 14 59 - -
Seca7g01134 189 Pfam B-box zinc finger 15 56 IPR000315 GO:0008270
Seca7g01134 189 MobiDBLite consensus disorder prediction 143 189 - -
Seca7g01134 189 Pfam PLATZ transcription factor 58 130 IPR006734 -
Seca7g01134 189 ProSiteProfiles Zinc finger B-box type profile. 17 56 IPR000315 GO:0008270
Seca7g01134 189 Gene3D Classic Zinc Finger 10 77 - -
Seca7g01134 189 CDD Bbox2 16 56 - -
Seca7g01134 189 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01134 Seca-Chr7 16139845 16141364 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca7g01134 PLATZ 4.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01134 - - tcc:18601328 234.958