Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01133 ATGCCAAGTTGGATTGAGGCATTTCTGGAAAATACTTTCTTTAACAAATGTCCTTCTCATCCAATTCGTAGGAATGAGTTAAATAAATACTGTATTAACTGCGATATGTCAGCTTGCCAATATTGTGTATCATCAGGTTCTCATCGCCATCACCAGATGCTTAAAATTTATAGACATGTTTACAAAGATGTTGTCTCCCTTTCTGCTATGGAAAAGTATGTTGATTGCTCGTATATCCAGCCCTACAAGTGCAATAAGCAACTGGTTATTTCTCTGAATCCTCTCCCCCATTGTGGTTCAACATTAAATAATGAGGCATCATGCAACATCTGCAATAGAAAGTTGACTGAACCTAATTTATATCGCTACTGCTCTATTTCTTGTAAGTCAATATCTTCTGCCTTTTTTATTGTAAATTTTCAGGTCAGAGCTGTTTCAAGAGAGCCTGATGATTCAGTTCCTTCTTCCATTTCCATCCAGAGTCCTCCTCCTCCTCCCGTGGAAAATCAGGAGGAAACTTCTGAACCCCCGAAAAGGAAAAGGAGTAGAAAGGGAACACCCCACAGAGCTCCCTTCTTCTAA 582 0.3935 MPSWIEAFLENTFFNKCPSHPIRRNELNKYCINCDMSACQYCVSSGSHRHHQMLKIYRHVYKDVVSLSAMEKYVDCSYIQPYKCNKQLVISLNPLPHCGSTLNNEASCNICNRKLTEPNLYRYCSISCKSISSAFFIVNFQVRAVSREPDDSVPSSISIQSPPPPPVENQEETSEPPKRKRSRKGTPHRAPFF. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01133 193 Pfam PLATZ transcription factor 58 129 IPR006734 -
Seca7g01133 193 SUPERFAMILY B-box zinc-binding domain 14 59 - -
Seca7g01133 193 ProSiteProfiles Zinc finger B-box type profile. 17 56 IPR000315 GO:0008270
Seca7g01133 193 Gene3D Classic Zinc Finger 10 75 - -
Seca7g01133 193 MobiDBLite consensus disorder prediction 149 193 - -
Seca7g01133 193 Pfam B-box zinc finger 15 56 IPR000315 GO:0008270
Seca7g01133 193 CDD Bbox2 16 56 - -
Seca7g01133 193 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01133 Seca-Chr7 16095462 16096980 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca7g01133 PLATZ 7.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01133 - - tcc:18601328 233.417