Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01130 ATGAAGCTCAAATTCCAATTGTTGGTTCTGTGTTTCTCTACCTTATTAGTATTAAATGATGCTTCTACTATGGTCTCAGATGGAGTGACTTTGTTGTCACTCCTGAGGCACTGGACCTTTGTGCCTCCTTCCATAAAATCAAGCTGGGAAGCCTCTGATTCCACTCCATGCTCTTGGATAGGAGTCCAGTGCAGCCATGCCTTTAATGTGGTCTCCCTTAACCTAACTTCTCTTGGGATTTTTGGTCAACTGGGACCAGAAATTGGACAATTGCATCACTTGCAGACCATTGTTTTGTTGAATAACAGTTTCTCAGGAAAAATAGTTCCAGAGTTAGGCAATTGTAGTCTGCTTGAGCATTTGGACCTTTCTAAGAACAGTTTTAGTGGAGAAATTCCAAATGAATTAGGAACATTAAGTAAATTAAGGGTCTTTGAATTATCTTTCAACCATTTGATAGGTGAAATTTCAGTCAATGTTTGGAGGATTCAGAGTCTTCAGCACATCCTAGTTCATAATAATAGCCTTATTGGGGAACTACCTTTAGATATGACAGAGCTCAAGCATCTAAGAAATATTTCATTGTATTACAACCAGTTCTCTGGAGTCATACCCCAAAGCTTGGGAATCAATAGCAGTTTAGTGAAGTTGGACTTCATGAATAATAGGTTCACTGGCAACATCCCACCAAATCTTTGTTATGGAAAGCAATTAAGTGTGCTGAACTTGGGGTTTAATCAACTTCAAGGTGGGGTATCTTCTGATATAGGAAGATGTGCAAGTCTAAGGAGATTGATTCTTAAAAAAAACAATTTGACTGGGTCTCTTCCTGATTTTGAGAGTAACATGAATCTCAATTACATGGACATCAGTGAGAACAGAATCACTGGAAAAATTCCACCAAGTTTGGGAAATTGCACAAATCTCACTATGATTATTTTTTCAATGAACAAATTTACTGGGCTCATACCACCAGAGCTTGGAAAGCTTGGGAATCTTTTGATTTTGGATGTTGCTCACAACAACTTGGGAGGTCCTTTGCCATCTCAGCTTTCAAACTGTACTAAAATGGATTACTTTGATGTGGGATTCAATGTGATTAATGGTTCATTTCCTTCTAGTTTGAGGAGCTGGACAGGGCTAACCACTTTAATCTTAGAAGAGAATCATTTTATTGGGGGTATCCCTGATTTCTTGTCAGAATTCAACAATCTTCTTGAGTTAAAAATTGGTGGAAATTTGTTCAAAGGTGAAATTCCTAAATCAATAGGAGCATTGCATAATCTGATATATGGGTTGAATTTGAGTGCTAATGGATTGACTGGTGAGATTCCTTTAGAAATTGGGAAGCTAATAAAGCTGCAAAGCCTGGATGTATCATTGAACAATTTGACCGGAAGCATAGATGTTCTTGGTGAGCTTCTTTCGTTAATAGAGGTTAATATTTCCTACAACAACTTCAATGGTTCTGTACCCAAAAATCTGATGAAGTTACTGAACTCCTCACCATCTTCTTTCTTGGGTAATTCTCACATATGTATCAATTGTTCACCTTTAGATGGCTTGAATTGCACTAAAGCTAGCCATTTGGAGCCATGTTCCAATGAATTTATTGATCACAATCACAAAAGAATCAGTAAACTTGTAATTGTGATGATAGAAGTTGGATCCTCAATGTTTGTTTCTGCCATGCTGGTAGTATTAGTTCACATGAATCTCCAAAAAAGATATAAGCAGGAAGTGAATGCTTCAGTTGAAGGGGAAGGACCATTGGCATCATCTTTTATTATTATTGGTAGAGGAGCCAACCAACATATTGGGCAAATAAATAAGCAAGAAGTTATGATCCGCACTGAAAAGCATTTATCTTCCCTTGTTAAGCAAGTGATGAAGGTGACTAACAACCTAAATGATCAGCATATTGTTGGCAGAGGAGCCCATGGAATTGTTTACAAAGTCCAACTAGGTCCAGACCAAGCACTTGCTGCAAAGAAGATTTCATTTTCAACCAACAGAGGGAAGAGCAAACATAAGCTCAAAGAAACTATGGTGAGGGAAGTTCAAATTTCTGGGATGATTGATCATCCAAATTTGGCCTCATACACAGACTATTGGTTTGGGAAGGACTATGGTGTAATCTTGTACAAGTACATGGAAAATGGAAGCCTGCATGATGTTTTACATGATGAAAGGAATCCACCACCATCCTTAAAATGGAATGTCCGGCTTAATATAGCCATTGGAGCTGCAAATGGACTAGCATATCTACATTATAACTGTCGACCTCCCATAGTACATAGAGACATCAAACCAAAAAATATACTCCTTGACCATAATCTGGAGCCTGTTATCACTGATTTTGGTACTTCCCTGCGAAGGAGATGGCATGAGCACTCTATTTTTCCTGAAAATAGGCAAAGGCTTTCAGCATATATTGCTGGTACCATTGGCTATATTGCACCAGAGAATGCATATGCAATAGTGGTGAGCAGAAAGTCTGATGTTTACAGCTATGGAGTAGTTTTGCTTGAACTAATAACCAGAAAGAAAGTATTAGATCAGTCATTTATGGAGGAGGGAACAAGTTTAGTAAGATGGATTAGATCTGTCTACACAGAACCACAAAAAATTGGAGAGATTGTTGATTCAAGTCTTGCAGGTGAATTTTCCCAATCAATAATAATAATGAAGCAAGTTAGTGCAGTGCTTGACTTGGCTTTGAGATGTACTCAGAGGGATCCAAGAAAGAGGCCCACAATAAGGAAAGTTGTTAGGTTCTTTCAGAACCCCATTTTTCTAAAGCAGAGGCATGAGTATGATGATGAAGCACCACATCCACAGGCACAAGTAGAACCAAGTAAAATAAGTGACTCTTACTCCACCAATCCAACTAATAGTATTAGTAATAGCAAAGTGGCTTCAAAGGAAGAGGTTTCTAACTTTTGGCAAACTACAAACTCACTTGAGGTAAAAAACAACCAACACAAGTCCCACATTGCTTGGAGGTTTCCACCAGAGGGATGGGTTAAAGTTAACATTCATAGCAATGCAACAGGAGGAATATGTGGAGGAATCATGCGTGGGGATAGTGGGGAATGGCTACAAGGTTTTACAGTGCGTTTTGCAGCATATAATGAGTCTGATGATGTTGTTGCTGGAATATGGGGAATATACCATGGAATGAAAATGGCTTGGGAATTTGGGTTTCCAAGAGTTATCATAGAGACAGATAATTTGACAGCAGTGCAACTACTCTTATATGTACCAACTAACAAGGTATATAAACTTATGTCATATTCATATCCCATTGTTCTTTGTCATGAATTCATTCAGAAAGATTGGGAGGTCAAGGTACAATACATTTTCAGAGAAGGCAACTTGTGTGCTAATTGGCTGGTCAATAGTGTTGATTATTGGGGTGAGGATGTTATTTTAAAAACCCCACCTAAGGAACTTGTTGATATTCTTAATCAGGATGTTTTTGATGCATCAACACCGATGGCTTAG 3507 0.3829 MKLKFQLLVLCFSTLLVLNDASTMVSDGVTLLSLLRHWTFVPPSIKSSWEASDSTPCSWIGVQCSHAFNVVSLNLTSLGIFGQLGPEIGQLHHLQTIVLLNNSFSGKIVPELGNCSLLEHLDLSKNSFSGEIPNELGTLSKLRVFELSFNHLIGEISVNVWRIQSLQHILVHNNSLIGELPLDMTELKHLRNISLYYNQFSGVIPQSLGINSSLVKLDFMNNRFTGNIPPNLCYGKQLSVLNLGFNQLQGGVSSDIGRCASLRRLILKKNNLTGSLPDFESNMNLNYMDISENRITGKIPPSLGNCTNLTMIIFSMNKFTGLIPPELGKLGNLLILDVAHNNLGGPLPSQLSNCTKMDYFDVGFNVINGSFPSSLRSWTGLTTLILEENHFIGGIPDFLSEFNNLLELKIGGNLFKGEIPKSIGALHNLIYGLNLSANGLTGEIPLEIGKLIKLQSLDVSLNNLTGSIDVLGELLSLIEVNISYNNFNGSVPKNLMKLLNSSPSSFLGNSHICINCSPLDGLNCTKASHLEPCSNEFIDHNHKRISKLVIVMIEVGSSMFVSAMLVVLVHMNLQKRYKQEVNASVEGEGPLASSFIIIGRGANQHIGQINKQEVMIRTEKHLSSLVKQVMKVTNNLNDQHIVGRGAHGIVYKVQLGPDQALAAKKISFSTNRGKSKHKLKETMVREVQISGMIDHPNLASYTDYWFGKDYGVILYKYMENGSLHDVLHDERNPPPSLKWNVRLNIAIGAANGLAYLHYNCRPPIVHRDIKPKNILLDHNLEPVITDFGTSLRRRWHEHSIFPENRQRLSAYIAGTIGYIAPENAYAIVVSRKSDVYSYGVVLLELITRKKVLDQSFMEEGTSLVRWIRSVYTEPQKIGEIVDSSLAGEFSQSIIIMKQVSAVLDLALRCTQRDPRKRPTIRKVVRFFQNPIFLKQRHEYDDEAPHPQAQVEPSKISDSYSTNPTNSISNSKVASKEEVSNFWQTTNSLEVKNNQHKSHIAWRFPPEGWVKVNIHSNATGGICGGIMRGDSGEWLQGFTVRFAAYNESDDVVAGIWGIYHGMKMAWEFGFPRVIIETDNLTAVQLLLYVPTNKVYKLMSYSYPIVLCHEFIQKDWEVKVQYIFREGNLCANWLVNSVDYWGEDVILKTPPKELVDILNQDVFDASTPMA. 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01130 1168 Gene3D Ribonuclease Inhibitor 181 254 IPR032675 -
Seca7g01130 1168 Gene3D Transferase(Phosphotransferase) domain 1 718 942 - -
Seca7g01130 1168 Gene3D Phosphorylase Kinase; domain 1 598 717 - -
Seca7g01130 1168 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Seca7g01130 1168 Pfam Protein kinase domain 638 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01130 1168 FunFam Nuclear pore complex protein NUP107 26 182 - -
Seca7g01130 1168 SUPERFAMILY RNI-like 161 519 - -
Seca7g01130 1168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 764 776 IPR008271 GO:0004672|GO:0006468
Seca7g01130 1168 CDD RNase_H_like 1022 1134 IPR044730 -
Seca7g01130 1168 Gene3D Ribonuclease Inhibitor 255 531 IPR032675 -
Seca7g01130 1168 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 236 521 - -
Seca7g01130 1168 Pfam Reverse transcriptase-like 1014 1135 IPR002156 GO:0003676|GO:0004523
Seca7g01130 1168 MobiDBLite consensus disorder prediction 938 972 - -
Seca7g01130 1168 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 718 935 - -
Seca7g01130 1168 SMART serkin_6 636 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01130 1168 ProSiteProfiles Protein kinase domain profile. 636 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01130 1168 Gene3D - 1011 1137 IPR036397 GO:0003676
Seca7g01130 1168 SUPERFAMILY Protein kinase-like (PK-like) 615 926 IPR011009 -
Seca7g01130 1168 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Seca7g01130 1168 SUPERFAMILY L domain-like 66 157 - -
Seca7g01130 1168 ProSitePatterns Protein kinases ATP-binding region signature. 642 665 IPR017441 GO:0005524
Seca7g01130 1168 MobiDBLite consensus disorder prediction 951 972 - -
Seca7g01130 1168 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 262 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01130 Seca-Chr7 16069268 16073384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01130 64 925 Receptor kinase-like Gene Family AT1G17750 44.189 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca7g01130 Pkinase 7.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01130 - - adu:107496784 1017.3