Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01128 ATGTGTGAGAAGAAGAAGGTGAAGGTGGTGACGGAGGAAGAAGAGGAGAACGGGAAGCAAACGACGTCGTGTTCGAGATCTTCTTCTTCTTCATCTTCTTCGTCTTCGACGGATGATAGAGAGTATGAGGTGCAGGACCTGAGGGATCGGTTGAGATCATCGAGAGGAAGCAGGTTCGATCTGATAGAGAATGAGTTTGGTTTCAATAACGGTTGGAGGAAGTTCAGTCGCCAAGCGCTCCTACATGAACTCGTTATCTTTCCTGATAACAGGTGGTATCGAGCATGGACAAAATTCATATTGGTATGGGCAGTGTACTCATCCTTCTTCACCCCAATGGAGTTTGCATTTTTTCGTGGCCTGCCAGAGAATCTCTTTGTACTGGATATCATTGGACAAGTAGCTTTTCTTGTGGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGACAGTCAAACCTATCGTATGGTCTACAAGCGAACTCCAATTGCTCTGCGGTATCTAAAATCTAGCTTTATCTTTGACTTTCTTGCATGTATGCCCTGGGACATCATCTACAAGTTCATGGTTCTTGGTCTAACCACTAGGATGACCTTTTATGAACAGGCTTGTGGACGAAAAGAGGCAGTGCGGTATCTTTTGTGGATTAGATTATATCGGGCGCGGAGAGTCGCAGATTTCTTCCAGAGGTTGGAGAAGGACATACGTGTCAATTACATTGTTACCCGGATTGTGAAACTCATAGTAGTTGAACTCTACTGCACACACACAGCAGCCTGCATTTTCTACTATCTGGCTACTACACTACCTGAATCACAAGAGGGGTACACATGGATAGGAAGTTTAAAACTGGGTGACTTCAGTTATTCACATTTCAGAGAAATTGATCTATGGAAGCGCTACACAACATCTTTGTATTTTGCTATTGTTACAATGGCTACTGTTGGCTATGGAGATATACATGCAGTAAATATGAGGGAGATGATATTCATAATGATATATGTTTCGTTTGACATGGTTCTCGGTGCTTATTTGATTGGTAACATGACAGCTTTGATAGTAAAGGGATCAAAGACTGAAAAGTTCAGGGACAAGATGACAGATCTTATGAAATATATGAACAGAAATAGACTTGGAAGGGATATCCGTGAACAAATAAAAGGCCATGTGCGCTTACAGTTTGAGAGCAGCTACACTGACGCTGCTCTCATCCAGGACATTCCCATTTCTATTCGATCTAAGATATCCCAAACATTGTATTTGCCATACATTGAAAAGGTTTCTCTTTTTAAAGGCTGCTCTTCAGAATTCATCAATCAGATTGTAAGTAATAGTTTTCCCATTGCCCCAGCATATCAATAA 1362 0.4148 MCEKKKVKVVTEEEEENGKQTTSCSRSSSSSSSSSSTDDREYEVQDLRDRLRSSRGSRFDLIENEFGFNNGWRKFSRQALLHELVIFPDNRWYRAWTKFILVWAVYSSFFTPMEFAFFRGLPENLFVLDIIGQVAFLVDIVLQFFVAYRDSQTYRMVYKRTPIALRYLKSSFIFDFLACMPWDIIYKFMVLGLTTRMTFYEQACGRKEAVRYLLWIRLYRARRVADFFQRLEKDIRVNYIVTRIVKLIVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDFSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHVRLQFESSYTDAALIQDIPISIRSKISQTLYLPYIEKVSLFKGCSSEFINQIVSNSFPIAPAYQ. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01128 453 Gene3D Helix hairpin bin 357 418 - -
Seca7g01128 453 MobiDBLite consensus disorder prediction 1 42 - -
Seca7g01128 453 SUPERFAMILY Voltage-gated potassium channels 88 354 - -
Seca7g01128 453 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g01128 453 FunFam Potassium channel SKOR 94 354 - -
Seca7g01128 453 PRINTS EAG/ELK/ERG potassium channel family signature 345 354 IPR003938 GO:0005249|GO:0006813|GO:0016020
Seca7g01128 453 PRINTS EAG/ELK/ERG potassium channel family signature 301 318 IPR003938 GO:0005249|GO:0006813|GO:0016020
Seca7g01128 453 PRINTS EAG/ELK/ERG potassium channel family signature 253 263 IPR003938 GO:0005249|GO:0006813|GO:0016020
Seca7g01128 453 PRINTS EAG/ELK/ERG potassium channel family signature 129 139 IPR003938 GO:0005249|GO:0006813|GO:0016020
Seca7g01128 453 PRINTS EAG/ELK/ERG potassium channel family signature 106 113 IPR003938 GO:0005249|GO:0006813|GO:0016020
Seca7g01128 453 PANTHER POTASSIUM CHANNEL AKT1 63 444 IPR045319 GO:0005249|GO:0006813
Seca7g01128 453 SUPERFAMILY cAMP-binding domain-like 357 445 IPR018490 -
Seca7g01128 453 Pfam Ion transport protein 94 354 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Seca7g01128 453 Gene3D - 95 355 - -
Seca7g01128 453 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01128 Seca-Chr7 16053040 16060948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01128 35 442 Ion Channels AT3G02850 71.429 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01128 K21867 - gmx:100814385 724.161