Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01102 ATGTCTCCTTTTGCGAGAAGTGTTCCCCAGATTTGGTTGCTTACAATATTGCTTTCAGCCAGCGATATTGCTCTTGGAAAAACACATGTGCAGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCACTGCAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTCCATCCTAGTGAGTCGTGGGAATGGAGTTTTAACCCTGCCAAATTCTTTTGGACCACACAATTCTATTGTCTCTTTCATTGGCAAGATAAAGATGGAGTCCAAGAGAAATGGTTTGATATATACATAGAAAATAGGGATGATTGCATAATTTGTACTTGGTTTATAAGCCAAGATAGACCATGTAGGAAAGTTACAGAAAAGGAGTCTGAATGCATTGAATGGAATAACTAA 405 0.3877 MSPFARSVPQIWLLTILLSASDIALGKTHVQVVNHLTGNLDLTFHCKSKDDDLGVQLLHPSESWEWSFNPAKFFWTTQFYCLFHWQDKDGVQEKWFDIYIENRDDCIICTWFISQDRPCRKVTEKESECIEWNN. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01102 134 Pfam Plant self-incompatibility protein S1 29 132 IPR010264 -
Seca7g01102 134 PANTHER - 26 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01102 Seca-Chr7 15296162 15296566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01102 27 134 Carbohydrate Esterase AT3G16970 37.069 5.25e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01102 - - cam:101513244 109.383