Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01077 ATGGGCAATCATCCTAAGGGCGTCAAATCCACAGAATTACTTCATAGTAGTATGGTTCAAAATGTCCTCGGCAGCAAATTTGCCCCAGATGCTTTGCTTCATAGCTACAAGAAGAGTTTTAATGGATTTGTCGCGAGACTAACAAGTGAGGAAGCACTGAGAATGGCAGAATTGGATGGCGTGGTCTCTGTTTTCCCAAGTAAAAACCATAAGCTCCATACAACAAGTTCATGGGACTTCATAGGCTTCCCTCAAGATATTAGAAGAACCAACATAGAGAGCGACATAATCATAGGAGTAATTGATACCGGAATATGGCCTGAGTCAGTTAGCTTTAATGACGAAGGATTTGGTCCACCACCACAGAAATGGAAGGGCAGTTGCCACAACTTTACCTGCAATAATAAACTAATTGGAGCAAAATATTTGCGCATAGATGGATTGTATGGAAAAGATGACATCATATCTCCAAGGGATTCGAATGGTCATGGGACTCATTGTGCCTCCACTGCTGCTGGAAACTCAGTTAAATCTGCAAGTTTATTTGGACTTGCTTCAGGGACAGCAAGAGGAGGAGTTCCATCAGCACGTATTGCTGTATACAAATCGTGTTGGTCAGGAGGTTGTGAAGAAGCTGACACCCTTGCAGCATTTGATGAAGCCATTGCAGATGGTGTTGACATCATTTCCCTTTCAGTGGGACCTCGAACAGTGATACACAAAAACTATTTTCAGGACATATATGCCATAGGAGCTTTCCATGCGATGAAGAAAGGCATATTAACATCGACATCTGCTGGTAATTTAGGTCCACAACTTTACTCAAGCCCAAAAGTTGCACCATGGTTACTTTCTGTAGCAGCTAGCACTATAGACAGAAAGTTTTTTACCAAGGTTCGGTTGGGTGATGGTACCATCTTTCAGGGAGTTTCAATAAATACATTTGATCTTAAAAATGTAAGTTATCCATTAATTTACGCTGGAGATGCACCCAACATCACTGGTGGATATAATAGTTCCATATCCAGGTCTTGCCTTGAAGGTTCTTTAGAACAAGATTTGGTAAAGGGAAAGATTGTTCTTTGCGATGGGGGTTCCTCATCAGTGGGACTCGTTTCTGGGGCAGCTGGTATTCTATTTCGTAGTGTCGCTCCACAAGATGTGGCACGTACATTTGCACTGCCAGCGATTCATCTTAGCGAAAACGATGGAAAACTCATACATTCTTACATAAATTCAACAAGTAATCCAACAGCTATAATATTTAAGAGTACTGAAGACAAAGATTTGTTTGCCCCATACATAGCTTCATTCTCATCTAGAGGTCCAAATGCTATCACTCCAGACATTCTCAAGCCTGATCTAGCTGCTCCAGGAGTTGACATTCTAGCTGCATGGTCTCCAATTTCTCCCATTTCTGGGGTTAAAGGCGATGATAGAGTAGCAAACTACAACATTATATCTGGAACTTCAATGGCTTGCCCTCATGCTACTGCAGCTGCTGCCTACGTCAAATCATTTCATCCCAATTGGTCACCGGCGACAATCAAATCTGCACTAATGACCACTGCCACCCCTATGAGTGCCACACTTAATCCGGAAGCTGAATTTGCTTATGGTGCGGGGCAAATTAACCCCATTAAGGCAGTGAATCCTGGATTAGTATATGATGCCGATGAAATAGATTATGTTAAGTTTCTATGTGGACAAGGTTATGATAATAAAAAGCTACGAACCATCACAGATGATAGTAGCAGTTGTACGTCAACTAATAATGGAACCGTTTGGGACCTTAATCTCCCATCTTTTGCTCTTTCCACAAACGTGTCAAGATCTTTTAGTCGCATTTTCCATAGAACTGTTACAAATGTTGGATCTGCAACATCGAGGTACAAAGCTAGAATAAACGCACCTCCATCTTTGTTAAACATTAAAGTGGAGCCAGATGTTTTGTCTTTCTCATCTGTGGGTGAAAAGAAGTCATTTACTCTAAGGATTGAAGGGAGCATTAATGTGGATATAGTTTCTTCTTCTTTGGTTTGGGATGATGGCGTTTTTCAAGTAAGGAGCCCTATTGTTGTTTATGCTAAATAA 2094 0.4131 MGNHPKGVKSTELLHSSMVQNVLGSKFAPDALLHSYKKSFNGFVARLTSEEALRMAELDGVVSVFPSKNHKLHTTSSWDFIGFPQDIRRTNIESDIIIGVIDTGIWPESVSFNDEGFGPPPQKWKGSCHNFTCNNKLIGAKYLRIDGLYGKDDIISPRDSNGHGTHCASTAAGNSVKSASLFGLASGTARGGVPSARIAVYKSCWSGGCEEADTLAAFDEAIADGVDIISLSVGPRTVIHKNYFQDIYAIGAFHAMKKGILTSTSAGNLGPQLYSSPKVAPWLLSVAASTIDRKFFTKVRLGDGTIFQGVSINTFDLKNVSYPLIYAGDAPNITGGYNSSISRSCLEGSLEQDLVKGKIVLCDGGSSSVGLVSGAAGILFRSVAPQDVARTFALPAIHLSENDGKLIHSYINSTSNPTAIIFKSTEDKDLFAPYIASFSSRGPNAITPDILKPDLAAPGVDILAAWSPISPISGVKGDDRVANYNIISGTSMACPHATAAAAYVKSFHPNWSPATIKSALMTTATPMSATLNPEAEFAYGAGQINPIKAVNPGLVYDADEIDYVKFLCGQGYDNKKLRTITDDSSSCTSTNNGTVWDLNLPSFALSTNVSRSFSRIFHRTVTNVGSATSRYKARINAPPSLLNIKVEPDVLSFSSVGEKKSFTLRIEGSINVDIVSSSLVWDDGVFQVRSPIVVYAK. 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01077 697 Gene3D - 567 696 - -
Seca7g01077 697 CDD Peptidases_S8_3 70 525 IPR034197 -
Seca7g01077 697 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Seca7g01077 697 ProSiteProfiles Serine proteases, subtilase domain profile. 77 550 - -
Seca7g01077 697 Pfam Subtilase family 94 542 IPR000209 GO:0006508|GO:0008236
Seca7g01077 697 Gene3D Peptidase S8/S53 domain 95 563 IPR036852 GO:0004252|GO:0006508
Seca7g01077 697 Pfam Fibronectin type-III domain 597 694 IPR041469 -
Seca7g01077 697 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 694 IPR045051 -
Seca7g01077 697 Pfam Peptidase inhibitor I9 10 73 IPR010259 -
Seca7g01077 697 CDD PA_subtilisin_like 299 421 - -
Seca7g01077 697 Gene3D - 292 428 - -
Seca7g01077 697 ProSitePatterns Serine proteases, subtilase family, histidine active site. 163 173 IPR022398 -
Seca7g01077 697 ProSitePatterns Serine proteases, subtilase family, serine active site. 489 499 IPR023828 -
Seca7g01077 697 PRINTS Subtilisin serine protease family (S8) signature 488 504 IPR015500 -
Seca7g01077 697 PRINTS Subtilisin serine protease family (S8) signature 93 112 IPR015500 -
Seca7g01077 697 PRINTS Subtilisin serine protease family (S8) signature 159 172 IPR015500 -
Seca7g01077 697 FunFam Subtilisin-like protease SBT1.5 95 389 - -
Seca7g01077 697 SUPERFAMILY Subtilisin-like 72 554 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01077 Seca-Chr7 14670817 14677703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01077 15 696 Subtilisin-like Serine Gene Family AT3G46850 50.071 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01077 - - gmx:100801111 1139.41