Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01067 ATGGAGTGCAATAAGGATGAGGCTACCAAGGCTAAAGAAATTGCTGAGTTGAAGTTTATTGCAAAGGATACTTTGAGTACAAAGAAGCTTGCTTTGAAAGCCCAAAATTTATCTCCTGCCCTTGAGGGTATTCCTCAAATGATATCAACCCTTGATGTGTATATTTCTGCTGAGAATAAAATAAATGGGAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTTATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGCAGCTTATGATGAGAAGAGAAATGGAAAAGCACGTAAAGGTTCAACTCTATTTGGAGGTTCAGCAAAAACAGGGGCTAATGGCAGTTACAATTTTACTAAGACTGTCCCTTCAAGTGCAAGGACTCCAAAGAACACTACTGCTAAGGAAAACACTTCATCTTCTACACATAAGTCAAAACCTACATTTTGGACTGCTTGCCATAATTTCAAAATGCAGTATGAGTATCTCAGAGTTTATCTTAACCTTAAACTTTTGTGTCCCAACTGCCATCAGGTATTTTTGCTGTAG 588 0.3912 MECNKDEATKAKEIAELKFIAKDTLSTKKLALKAQNLSPALEGIPQMISTLDVYISAENKINGKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKAKRAAYDEKRNGKARKGSTLFGGSAKTGANGSYNFTKTVPSSARTPKNTTAKENTSSSTHKSKPTFWTACHNFKMQYEYLRVYLNLKLLCPNCHQVFLL. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01067 195 MobiDBLite consensus disorder prediction 128 158 - -
Seca7g01067 195 ProSiteProfiles dnaJ domain profile. 37 106 IPR001623 -
Seca7g01067 195 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Seca7g01067 195 PANTHER BNAC03G44070D PROTEIN 1 63 - -
Seca7g01067 195 PRINTS DnaJ domain signature 78 98 IPR001623 -
Seca7g01067 195 PRINTS DnaJ domain signature 98 117 IPR001623 -
Seca7g01067 195 PRINTS DnaJ domain signature 62 77 IPR001623 -
Seca7g01067 195 CDD DnaJ 64 95 IPR001623 -
Seca7g01067 195 Gene3D DnaJ domain 60 161 IPR036869 -
Seca7g01067 195 Pfam DnaJ domain 64 103 IPR001623 -
Seca7g01067 195 SUPERFAMILY Chaperone J-domain 64 109 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01067 Seca-Chr7 14516328 14516987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01067 4 193 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.545 7.14e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01067 - - lja:Lj2g3v0520120.1 314.694